Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_019517.1 Length=136947 Score E Sequences producing significant alignments: (Bits) Value seq4979 131 1e-25 >seq4979 Length=1283317 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133643 CGAATTATTTCTAACCTGTCCCGCATTAAGCCCAGCCAAATGGAGTGCTCCAGGCTATCA 133702 ||||| || || | || |||||||| || ||||||||||| || |||||||| | ||| Sbjct 967149 CGAATAATCTCCAGCCGATCCCGCATCAACCCCAGCCAAATCGAATGCTCCAGCCCATCG 967208 Query 133703 TCGTAGTGCTCAAAATCCCTTCCGGTATTGAATGGCGGGTCTATGTAAACACACTTCACT 133762 ||||| ||| ||| | || || || || | ||||| || || | ||||||||||| Sbjct 967209 TCGTAATGCGTAAACGCGCTCCCCGTGTTATACGGCGGATCAATAAACACACACTTCACC 967268 Query 133763 TTGCCTGCATACTCTTGCTCTAGTGCCTTCAATGCCAGTAAGTTATCGCCAAAAATCAGT 133822 || | | |||| ||| || ||||| || ||||| |||||||| ||||||||||| Sbjct 967269 CGCCCCGAAAACTCCGCCTCCAGCGCCTTTAACGCCAGCAAGTTATCCCCAAAAATCAGC 967328 Query 133823 TTATTATCAAAAATATC 133839 ||||||||||| ||| Sbjct 967329 CGATTATCAAAAACATC 967345 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 132680 TAATAGCGAAAGCCCCCGCCACCGTGCCAGTTTACAGATTTAGAAATACCACTTTGATCT 132739 || || |||||||||||||| || ||||| ||||| | | | ||| || | || ||| Sbjct 966285 TAGTAACGAAAGCCCCCGCCGCCTTGCCAATTTACCGCCTCACTAATGCCGCCTTTGTCT 966344 Query 132740 TCGCCATCGATCACTTTTTGCAAGCGCGGGATGATATGGGTATGACAATGATCACCTAGC 132799 |||||||| |||||||| | || |||||||||||| || ||||| ||||| ||||| | | Sbjct 966345 TCGCCATCAATCACTTTCTTCAGGCGCGGGATGATGTGCGTATGGCAATGCTCACCCAAC 966404 Query 132800 TCGACCGAAATCCAACGTCTTTTCATCTTGTGAGCTACAGCAGCAGTAGTTCCTGAACCG 132859 || | | ||||| || | ||||||||| || || || | || || || |||||| Sbjct 966405 TCAATCATGATCCAGCGCCGACCCATCTTGTGGGCGACCGCGCCGGTGGTGCCGGAACCG 966464 Query 132860 CCGAACGAATCCAAGAC 132876 |||| || || | ||| Sbjct 966465 GCGAAGGAGTCTAGGAC 966481 Score = 123 bits (136), Expect = 2e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 133643 CGAATTATTTCTAACCTGTCCCGCATTAAGCCCAGCCAAATGGAGTGCTCCAGGCTATCA 133702 || || || || | || |||||||| || ||||||||||| || ||||||| | ||| Sbjct 8730 CGGATAATCTCCAGCCGATCCCGCATCAACCCCAGCCAAATCGAATGCTCCACCCCATCG 8789 Query 133703 TCGTAGTGCTCAAAATCCCTTCCGGTATTGAATGGCGGGTCTATGTAAACACACTTCACT 133762 ||||| ||| ||| | || || || ||| | |||||||| || |||| |||||||| Sbjct 8790 TCGTAATGCGTAAACGCACTGCCCGTGTTGTACGGCGGGTCAATAAAAACGCACTTCACC 8849 Query 133763 TTGCCTGCATACTCTTGCTCTAGTGCCTTCAATGCCAGTAAGTTATCGCCAAAAATCAGT 133822 || || | ||| || ||||| | |||||||| ||||| | ||| || ||||| || || Sbjct 8850 TTCCCCGTATATTCCTGCTCCAAGGCCTTCAACGCCAGCAGGTTGTCACCAAAGATAAGC 8909 Query 133823 TTATTATCAAAAA 133835 | ||||| |||| Sbjct 8910 TGGTTATCGAAAA 8922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438052916333920