Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_019527.1 Length=43551 Score E Sequences producing significant alignments: (Bits) Value seq6685 208 2e-49 >seq6685 Length=40117 Score = 208 bits (230), Expect = 2e-49 Identities = 708/1085 (65%), Gaps = 35/1085 (3%) Strand=Plus/Minus Query 26579 GCCGTCGCTGGTGATTTTGCCACTGCCAACCCCCGCGCATCCTTCCCGGCTGGCGAGGGC 26638 || ||| ||| || || ||| | ||||||||||| | || || ||| ||| Sbjct 15465 GCTGTCAATGGGGACTTCGCCTCGGCCAACCCCCGGTCCTCGGTCGTGGCCCCTGAGAAT 15406 Query 26639 CAATATGTTGCCGCTGCTGCCGGTGTAACCGTTGGCCGATTCGCCTGGATCGACGCCGTT 26698 || |||||| | ||||| || ||||| || ||||||||||||||| | | || | | Sbjct 15405 GGATTTGTTGCAGGCGCTGCAGGAGTAACTGTCGGCCGATTCGCCTGGGTACAGGCGGAT 15346 Query 26699 ACCGGCCTGGTGTCCAACACTGGCACCGGCAAGCCCGATGGCTTCATCCACCGCGAACAG 26758 | ||| ||| || || || || ||||| || ||| | |||||||| ||| Sbjct 15345 GGGTACACAGTGCTCAATACCGGAACGGGAAAGCCTGACGGCATTATCCACCGGGAAGGC 15286 Query 26759 CAGGCGCTGATCTCCGTCTACCTGGCCGAAACCAGCAACGTTGTGCCGCAGGGCTTCCCT 26818 || || | ||| | |||||||||||| | | | || || ||| ||| | || Sbjct 15285 CAAGCCCATATCACAACCTACCTGGCCGAGAGTGGGATGGTGGTTCCGGCCGGCATGGCT 15226 Query 26819 GTGACCGTCATGCGCACAGGCGACTACTGGGCAACCGCTACCGTGGCCGCCGCAGTGAAA 26878 | || |||||||||| || ||||| | || | |||||||||||||| ||| Sbjct 15225 ATCACTATCATGCGCACCGGAGACTATTTCATCACTTCCACCGTGGCCGCCGCGAACAAA 15166 Query 26879 GGCAATAAGGTGTTCGCCAAGCTGTCTGACGGCACCGTCCAGGCGGGCGCAGCTGGCGCA 26938 ||| | |||| ||| ||||||||| | || || || | ||| ||| ||||| || ||| Sbjct 15165 GGCCAGAAGGCGTTTGCCAAGCTGACAGATGGGACTATGCAGCCGGCAGCAGCCGGGGCA 15106 Query 26939 ACCATCGCCGGTTTCATCGAGACCGATTTCG----TTATCACCCAAGGCTGTGCTCTGAA 26994 || ||||||| || || ||||| || |||| || || ||| || | || || Sbjct 15105 ACAGTCGCCGGATTTATTGAGACTGACTTCGCAATTTCTCGGCCA--GCCGGAATCGGA- 15049 Query 26995 CGAGCTGGCTGTGATCACCCTGTAAGGAGCGGCAACCATGATTATCGACTTCA--AAGAA 27052 || |||| || ||||| | ||||| | || || || | || | | |||| Sbjct 15048 -GAATTGGCCGTAATCACATTTTAAGGGGGTACATAGAT-ATGAGTGAATCTATCAAGAT 14991 Query 27053 CT-GGAGCGCCGCGCCGGTATCCACTTCATGGGCCAGCA-GCC-CATGGCGATG-GATAA 27108 | ||| || || ||| |||||||| | | ||| | | || | | || || Sbjct 14990 TTTGGAAAATTCTGCTGGCATCGTATTCATGGGGGTGAACGCCTCCTTGCAAAGTGACAA 14931 Query 27109 ---CACGCTGAG-CTACG--ATTTCAACC------TTGCCATGGACGCTCAGCCCGGCCT 27156 | ||| || || || | | || || || || || || || | || Sbjct 14930 TGCCTCGCAGACACTTCGCGAAACCCACGGAGGGATTACCTGTGATGCGCAACCAGCACT 14871 Query 27157 GGTAACCGTCAGCAACTCCGGCATCCCGGCGTTCCTGACCACCTACATCGACCCGAAAAT 27216 ||| || |||| | | || ||||| | |||||| |||||| ||||||||| || | Sbjct 14870 GGTTACTACGAGCAGCGCTGGTATCCCATCCTTCCTGTCCACCTTCATCGACCCCAATGT 14811 Query 27217 GATCGAGGTACTGGTTGCCCCGATCAAGGCAGCCGAGGCAGTCGGTTCCGAGGTGAAGAA 27276 |||| ||||| |||| | || || ||| || ||| | ||| || |||| || Sbjct 14810 GATCAAGGTATTGGTATCTCCAATGCGGGCTGCTGAGATTGCCGGGCAAGAAATGAAAAA 14751 Query 27277 AGGCGACTGGATCACCGAAACCGCCATGTTCCCGGTTGTGGAATCCACCGGCCAGACCGC 27336 ||||||||| | || || || ||||||||||| ||||| || ||||||| | | | Sbjct 14750 GGGCGACTGGGTAACGGATACAGCCATGTTCCCCGTTGTAGAGGCCACCGGTGTGGTCTC 14691 Query 27337 TGCATATGGTGACTACA--ACAACTCCGGCTCCACCGGCGTGAACACCAACTTCCCGCAG 27394 || ||||| || |||| |||| | ||| | |||| ||| | ||||||||| Sbjct 14690 GGCGTATGGAGATTACAGCACAAGT--GGCGTGTCAGGCGCAAACGTAACCTTCCCGCAA 14633 Query 27395 CGCCAGAGCTTCCATTACCAGACCGTCTCCCAGTGGGGCGAGAAGGGGCTGGAGCGTGCA 27454 || ||| || |||||| ||||| | | || ||||| ||| | ||| ||||| Sbjct 14632 CGGCAGGCATTTCATTACGAGACCATGACGCAATGGGGTGAGCGAGAGCTTGAGCGGTAT 14573 Query 27455 GGCGCCGCCCGTATCGACTGGGCAAGCCGTGTCGGGATCGCCTCCGTGCTGACCCTGAAC 27514 ||| ||| ||||||||||||| | || || ||||| ||||| || || ||| Sbjct 14572 GGCCTTGCCAAGATCGACTGGGCAAATCAGGTTAATATGGCCTCTGTGCTTACTCTCAAC 14513 Query 27515 AAGTTCCAGAACAAGACCTACCTCTTCGGTGTGGCTGGTTTGCAGAACTACGGCATGCTG 27574 |||| ||| |||||| | || | | ||||| |||| ||||||| || ||| | ||| Sbjct 14512 AAGTACCAAAACAAGTCATATTTTTATGGTGTTTCTGGGCTGCAGAATTATGGCCTTCTG 14453 Query 27575 AACGA-CCCAGCCCT-GCCCGCCAACCTGACCCCTGGCACCAAGGCGGCAGGCGGCACCA 27632 ||||| || || | | || | || | | | ||| |||||| | || || ||||| | Sbjct 14452 AACGATCCTAGTCTTAGCACCCCTA--TCAGCCCGACCACCAAAACTGCGGGTGGCACTA 14395 Query 27633 CCTGG 27637 ||||| Sbjct 14394 CCTGG 14390 Score = 89.7 bits (98), Expect = 1e-13 Identities = 194/288 (67%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 21945 TGATACTGGATCCCCGAACCATCAAGAAAGGCAGCCTCACCGGCTTCTCTAACATAGAGC 22004 ||||||| |||| || ||||| ||| || ||||| |||| | ||| | ||| Sbjct 19489 TGATACTTGATCGGCGGACCATAAAGGTGGGAAGCCTAGCCGGGATTAAAAACGTGGAGG 19430 Query 22005 CGATGTGGACCAGCCCCAGCGCCTACAACGCTCTCGA-CCCGACCGCGCCGGACTTCTAT 22063 |||| ||||| | ||| | |||||| || | || |||| || | | |||||| || Sbjct 19429 CGATCTGGACTACCCCTTCGGACTACAATGCGTTGGATCCCGGCCAC-CGGGACTTTTAC 19371 Query 22064 AAGCCCAGCACATGGTGGGTGTTGGGGCGGGAGATGCACGCTTCGCGCCTGCTGACCATC 22123 || | | |||||| || |||| || |||| || || || | || ||| Sbjct 19370 CGACCTACCTCATGGTATATGATGGGCAAAAAGGTGCATGCCAGCCGATTGATCACTATC 19311 Query 22124 ATAACCCGCCCGCTGCCGGACATGCTCAAGCCTGCCTATAACTTCTCTGGGATCTCAATG 22183 || || ||||| ||||||||||| || |||||| | ||||| | ||||| || | Sbjct 19310 ATCACTCGCCCACTGCCGGACATCCTTAAGCCTTTATTCAACTTTGCGGGGATGTCGCTT 19251 Query 22184 TCCCAGCTGGCACAGCCCTACGTTGAGAACTGGTTGCGCACCCGGCAA 22231 || || ||||| |||| ||||| || || ||| |||| ||| || || Sbjct 19250 TCGCAATTGGCAGAGCCATACGTGGATAATTGGCTGCGGACCAGGAAA 19203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139226659028216