Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq3574 104 7e-18 >seq3574 Length=6226 Score = 104 bits (114), Expect = 7e-18 Identities = 376/583 (64%), Gaps = 4/583 (1%) Strand=Plus/Plus Query 45522 TGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAAA 45581 |||| |||| ||| ||||||| | || | || || |||||| | || || ||||| | Sbjct 2723 TGTTTGGCCACCAGATGCGCTTCGATCTGAACGAAGGCTTCCCGGTGGTCACCACGAAGA 2782 Query 45582 AGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAATG 45641 || |||| | ||||| |||||||| ||||| | |||||| | || | Sbjct 2783 AGGTGCACCTGAAAAGCATCATCCTGGAACTGCTGTGGTTCCTGCGCGGCGATTCCAACG 2842 Query 45642 TTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCG 45701 |||| ||||||| || ||| || ||| |||| ||||||| | |||| Sbjct 2843 CCCGCTGGCTGCAGGATCGCGGCGTGCGCATCTGGAACGAATGGGCCGGGCCCGATGGCG 2902 Query 45702 ATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGG-GAAAACG 45760 | || || || | ||||||| ||| ||||| ||| | | ||||| | || Sbjct 2903 ACCTGGGGCCGGTGTACGGCGTGCAGTGGCGCAGCTGGCCCACGCCCGACGGCGGCCACA 2962 Query 45761 GTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCGGTTG 45820 ||||||| || || | ||| | ||| | ||| |||||| | |||||||| | Sbjct 2963 -TCGACCAGATGGCCGAGGTGGTGAAGCAGCTCAGAACCAACCCCGATTCGCGGCGCATC 3021 Query 45821 CTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTCATTAC 45880 | || ||||| ||||||||||| | || | ||| || || || ||| | Sbjct 3022 ATCGTCAGCGCCTGGAACGTGGCCGAACTGCACAAGATGGCCCTGGTGCCCTGCCATGCC 3081 Query 45881 GCCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCATGCATGTGGCAACAGCGTTCTGTC 45940 ||| ||||| || || || | || || || ||| | | ||||| | | Sbjct 3082 TTCTTCCAGTTCTATGTGGCCGAAGGGCGCCTGAGCTGCCAGCTCTACCAGCGCAGCGCC 3141 Query 45941 GATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACATATGGTT 46000 || | || || || |||| || |||||||| ||||| |||||| |||| || ||| | Sbjct 3142 GACATTTTCCTGGGCGTGCCCTTCAACATCGCCAGCTACGCGCTGCTGACGCACATGCTG 3201 Query 46001 GCCCAACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGCGACGTCCATTTG 46060 || || || ||||| | | || ||||| |||| | || || |||||| ||| | Sbjct 3202 GCGCAGCAGTGCGATTTGCAGGTGGGCGATTTCATCTGGACAGGTGGCGACTGCCACATC 3261 Query 46061 TACAAAAATCATCTGGAACAA-GCGAAACTGCAGCTGACGCGC 46102 ||||| | ||| | ||||| ||| ||||||||||||||| Sbjct 3262 TACAACGACCATTTCGAACAGTGCGCG-CTGCAGCTGACGCGC 3303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157733472987704