Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq4979 96.9 1e-15 >seq4979 Length=1283317 Score = 96.9 bits (106), Expect = 1e-15 Identities = 220/329 (67%), Gaps = 4/329 (1%) Strand=Plus/Plus Query 9695 CATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCCG 9754 |||||||||||| || |||| || |||| |||||||| || || |||||| | | Sbjct 318236 CATGGCATCCGTTAATAAAGCAATTATCGTTGGCAATCTGGGCAAGGATCCGGAAGTCAG 318295 Query 9755 CTATCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTTACAA 9814 ||| | || ||||| || || | |||||| | ||||| | ||| | || Sbjct 318296 ATATACGGCCAGTGGCGAGGCGATTTGCAACATTACTGTGGCGACCAGCGAAAACTGGAA 318355 Query 9815 GGACAAAGCCAGCGGCGACTTCAAAGAAGTGACCGAGTGGCACCGCGTCGCCTTCTTCGG 9874 |||||| | | ||| || |||||| |||||||||||| ||| | | || ||||| Sbjct 318356 GGACAAGACGACCGGAGAGAAGAAAGAACAGACCGAGTGGCATCGCATTTCTTTTTTCGG 318415 Query 9875 CCGCCTCGCCGAGATCGTCGACGAGCACCTGCGCAAGGG--CGCATCGGTCTACATCGAG 9932 || || || | | | | || | || ||||| |||| | |||| ||||| Sbjct 318416 AAAGCTGGCTGAAGTTGCAGGCCAGTATCTTAAAAAGGGATCGCA--GATCTATGTCGAG 318473 Query 9933 GGGCGCATCAAAACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAG 9992 || | ||| || ||||||||| || | |||||||| || |||||||||||| Sbjct 318474 GGCAGTATCCGTACCCGGAAGTGGACCGACAAGGAAGGCCAGGAGCGTTACACGACCGAG 318533 Query 9993 ATCGTCGCCGACAAGATGCAGATGCTCGG 10021 || || |||| ||||| | |||||||| Sbjct 318534 ATTCGCGGCGACGAGATGAAAATGCTCGG 318562 Score = 95.1 bits (104), Expect = 5e-15 Identities = 79/96 (82%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 7806 AATATGGAGGCGTGGCAGAGTGGTTTAATGTACTGGATTTGAAATCCAGCGACGGT--AA 7863 ||| |||| ||||||||||||||||||||| | || |||||| || ||| || || Sbjct 1280987 AATTTGGAAGCGTGGCAGAGTGGTTTAATGCTCGGGTCTTGAAAACCCGCGTGGGGGCAA 1280928 Query 7864 CCCGTCCGTGAGTTCGAATCTCACCGCCTCCGCCAG 7899 ||| |||||||||||||||||||||| |||||||| Sbjct 1280927 CCCCACCGTGAGTTCGAATCTCACCGCTTCCGCCAG 1280892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201299429207148