Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq3957 86.0 5e-12 >seq3957 Length=668572 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 28547 TGTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGA 28606 ||| |||||||| || || |||||||||||||| || || ||||| ||| || || Sbjct 478680 TGTCAAAATGCAGATCTTCGTAAAAACATTAACAGGGAAGACCATAACCTTAGAGGTTGA 478739 Query 28607 ACCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGT 28666 |||||||| || | | || | ||| || ||| ||||||||||| | || Sbjct 478740 GCCTTCAGACACAATCGATAATGTGAAGGCCAAGATCCAAGACAAAGAGGGCATTCCACC 478799 Query 28667 AGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGA 28726 ||||| ||| |||| ||||| || |||||||| | || ||| | || || | || Sbjct 478800 TGATCAGCAGCGACTGATCTTCGCTGGCAAACAGCTTGAGGATGGTCGCACATTGTCAGA 478859 Query 28727 TTATAACATTCAAAAAG 28743 || |||||||| |||| Sbjct 478860 CTACAACATTCAGAAAG 478876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425357951764644