Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq6036 520 3e-143 >seq6036 Length=8020 Score = 520 bits (576), Expect = 3e-143 Identities = 715/997 (72%), Gaps = 2/997 (0%) Strand=Plus/Minus Query 17831 TGAAGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAG 17890 |||||||||||||| |||||||| || || ||||| |||||||| ||||| | || | Sbjct 1028 TGAAGCTAAATCTAATGGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATACCTAA 969 Query 17891 GTTAGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAAT 17950 | ||| | ||| | | |||||||| || | || | ||| | |||||| Sbjct 968 ATCAGCACGGTTAACGATATCAGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAAC 909 Query 17951 GGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 18010 ||||||||||||||||| || || | || || |||||||| || ||||||| || Sbjct 908 TGATTGGTTGAAGTTGAAACCGTTTAAGTTGAACGCCATAGTACTAATACCCATAGCAGT 849 Query 18011 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTT 18070 | ||| || | || ||||| ||| |||||||| |||| | | ||||| Sbjct 848 TAACCAGATACCTAAAACTGGCCATAAAGCTAAGAAGAAGTGTAAAGCACGAGAGTTGTT 789 Query 18071 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATA 18130 || ||| || |||||||| | | || ||||| || ||||| ||||| || || || Sbjct 788 GAATGAAGCGTATTGGAAGATTAAACGACCGAAGTAACCGTGAGCTGCAACGATGTTGTA 729 Query 18131 CGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTC 18190 || ||||||||||| || ||||| || || ||||| || || ||||| ||||| Sbjct 728 AGTTTCTTCTTCTTGACCGAATTTGTAACCGTAGTTAGTTGATTCGCTTTCAGTTGTTTC 669 Query 18191 TCTAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAA 18250 | ||| | || ||||| || | ||||||||||| | |||||||| ||||| || Sbjct 668 ACGAATTAAAGAAGAAGTTACTAATGAACCGTGCATAGCTGAGAATAAAGAACCACCAAA 609 Query 18251 TACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAA 18310 ||| || |||||||| ||| ||||| || ||||| | || ||||| || |||||||| Sbjct 608 TACACCAGCAACACCAGCCATGTGGAATGGGTGCATTAAAATGTTGTGCTCAGCTTGGAA 549 Query 18311 TACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCC 18370 ||| |||||||| ||||||||||| |||||| | |||||||||||||||||| || Sbjct 548 TACTAACATGAAGTTGAAAGTACCAGAAATACCTAAAGGCATACCATCAGAGAATGAACC 489 Query 18371 TTGTCCAAAAGGATAAACGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAAG 18429 ||| |||| || || || | ||||||| ||||| | ||||||||||| || || ||| Sbjct 488 TTGACCAATTGGGTATACTAAGAATACTGCAGAAG-CTGCTGCTACTGGAGCAGAGAAAG 430 Query 18430 CAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGT 18489 | || | ||||| || |||||||||| | ||| | |||||||| || ||||||| Sbjct 429 CTACGAAGATCCAAGGACGCATACCTAAACGGTAAGATAATTCCCATTCACGACCCATGT 370 Query 18490 AAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATA 18549 ||| ||| | || | | ||||| | || || | ||| || || || ||||| |||| Sbjct 369 AAGATGCTACTCCTAATAAGAAGTGACAAACGATTAATTGGTAAGGACCACCGTTGTATA 310 Query 18550 ACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAG 18609 ||||||| |||| | || |||||||| |||||||||||||| | |||||| ||||||| Sbjct 309 ACCACTCATCGATTGAAGCTGCTTCCCAAATTGGGTAGAAGTGCATACCGATAGCGTTAG 250 Query 18610 ATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAG 18669 | |||| | ||| || || ||||||||||| || || | ||| | |||| || | Sbjct 249 AACTAGGGATAACTGCACCAGAGATGATGTTGTTACCGTATAATAATGAACCTGCTACTG 190 Query 18670 GCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTG 18729 ||||||| |||||||| || ||||| |||||||| || | ||||| || | | | Sbjct 189 GCTCACGGATACCATCGATATCAACTGGAGGAGCTGCGATGAATGCGATGATGTAACAAG 130 Query 18730 TAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGT 18789 || ||| ||||| | || ||||| ||| | |||||||| || | ||| | |||| Sbjct 129 AAGTTGCTGTTAATAATGTAGGGAACATTAAACAACCAAACCAACCGATGTATAAACGGT 70 Query 18790 TGTTTGTACTCGTAACCCAGTCACATAAACTTTCCCA 18826 | | ||||| |||| ||| |||| |||| |||||| Sbjct 69 TTTCAGTACTAGTAATCCAACCACAGAAACGTTCCCA 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151302163157384