Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq6036 654 0.0 >seq6036 Length=8020 Score = 654 bits (724), Expect = 0.0 Identities = 710/947 (75%), Gaps = 6/947 (1%) Strand=Plus/Minus Query 103187 GGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAGACCAGCGCGGTTGAGA 103246 ||||||||||| |||||||| |||||||| ||||||||||| | | |||| ||||| | Sbjct 1012 GGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATACCTAAATCAGCACGGTTAACG 953 Query 103247 ACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGATGGACTGGTTGAAGTTG 103306 | || ||||| ||||| | |||||||| || ||| | | || |||||||||||| Sbjct 952 ATATCAGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGATTGGTTGAAGTTG 893 Query 103307 AATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGTGAACCAGATACCCACT 103366 || ||||| | |||||||||||| || |||| ||| | || || ||||||||||| | Sbjct 892 AAACCGTTTAAGTTGAACGCCATAGTACTAATACCCATAGCAGTTAACCAGATACCTAAA 833 Query 103367 ACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTTGAATGATGCGTATTGG 103426 ||||| | |||||||||||||| ||||||||| Sbjct 832 ACTGGCCATAAAGCTAAGAAGAAGTGTAAAGCACGAGAGTTGTTGAATGAAGCGTATTGG 773 Query 103427 AAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTATGTCTCTTCCTCTTGT 103486 ||||| ||||||||||||||||| ||||| || ||||||||||| || ||||| ||||| Sbjct 772 AAGATTAAACGACCGAAGTAACCGTGAGCTGCAACGATGTTGTAAGTTTCTTCTTCTTGA 713 Query 103487 CCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTCACGAACCAGCGAGGAC 103546 ||||| |||||||| ||||| ||||| ||||||| || ||||||| | || || Sbjct 712 CCGAATTTGTAACCGTAGTTAGTTGATTCGCTTTCAGTTGTTTCACGAATTAAAGAAGAA 653 Query 103547 GTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGAAGACTCCAGCAACGCCC 103606 || || | |||||||||||||| ||| | |||||||| || || |||||||| || Sbjct 652 GTTACTAATGAACCGTGCATAGCTGAGAATAAAGAACCACCAAATACACCAGCAACACCA 593 Query 103607 AGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGAAGACCAGCATGTAGTTG 103666 ||||||||| |||||||| | |||||| || || |||||||| || | |||| ||||| Sbjct 592 GCCATGTGGAATGGGTGCATTAAAATGTTGTGCTCAGCTTGGAATACTAACATGAAGTTG 533 Query 103667 AAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAACCTTGACCAAAGGGGTAG 103726 || || || |||||||| ||||||||| |||| ||||| ||||||||||||| ||||| Sbjct 532 AAAGTACCAGAAATACCTAAAGGCATACCATCAGAGAATGAACCTTGACCAATTGGGTAT 473 Query 103727 ACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATGCGACACAGATCCAGGGG 103786 || ||||||||||| || || || || || ||||||||| | || || ||||||| || Sbjct 472 ACTAAGAATACTGCAGAAGCTGCTGCTACTGGAGCAGAGAAAGCTACGAAGATCCAAGGA 413 Query 103787 CGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCAT---ATATGCATAGATGCCA 103843 ||||| || | |||||| || |||||||| ||||| ||||| | |||| || | | | Sbjct 412 CGCATACCTAAACGGTAAGATAATTCCCATTCACGACCCATGTAAGATGC-TA-CTCCTA 355 Query 103844 ATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACAGCCACTCATCAAGA 103903 || | |||||| | || | | |||| ||||||||||||| || | ||||||||| | Sbjct 354 AT-AAGAAGTGACAAACGATTAATTGGTAAGGACCACCGTTGTATAACCACTCATCGATT 296 Query 103904 GATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGGAGGAGGGAACAACT 103963 || |||||||||||||| || |||||||| | ||| || ||||| || || | |||| Sbjct 295 GAAGCTGCTTCCCAAATTGGGTAGAAGTGCATACCGATAGCGTTAGAACTAGGGATAACT 236 Query 103964 GCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACGGGTTCACGAATGCCG 104023 |||||||||||||||||||||||||| | | |||||| || || || ||||| || || Sbjct 235 GCACCAGAGATGATGTTGTTACCGTATAATAATGAACCTGCTACTGGCTCACGGATACCA 176 Query 104024 TCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAAGCAGATGGTTGCCGCCAAC 104083 |||||||| || ||||| ||||| | ||| || | |||| | || ||||| | || Sbjct 175 TCGATATCAACTGGAGGAGCTGCGATGAATGCGATGATGTAACAAGAAGTTGCTGTTAAT 116 Query 104084 AGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACGGTT 104130 | || |||| ||| | ||| |||||||| | || | |||||| Sbjct 115 AATGTAGGGAACATTAAACAACCAAACCAACCGATGTATAAACGGTT 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633442044638880