Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq6036 524 2e-144 >seq6036 Length=8020 Score = 524 bits (580), Expect = 2e-144 Identities = 648/884 (73%), Gaps = 2/884 (0%) Strand=Plus/Minus Query 21483 GGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCACGGTTAAGA 21542 ||||||||||| ||||| || || ||||| || || | || | | |||||||||| Sbjct 1012 GGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATACCTAAATCAGCACGGTTAACG 953 Query 21543 ATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGGTTAAAGTTG 21602 || |||||||| |||||||| || | || | | | ||| | |||||||| |||||| Sbjct 952 ATATCAGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGATTGGTTGAAGTTG 893 Query 21603 AAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAATACCTACA 21662 ||||| || |||||||| ||||| ||| | || | |||| ||||| ||||||| | Sbjct 892 AAACCGTTTAAGTTGAACGCCATAGTACTAATACCCATAGCAGTTAACCAGATACCTAAA 833 Query 21663 ACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTGG 21722 || ||||| ||| | ||||| || | | ||| || || || || ||| |||||| Sbjct 832 ACTGGCCATAAAGCTAAGAAGAAGTGTAAAGCACGAGAGTTGTTGAATGAAGCGTATTGG 773 Query 21723 AAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTTGA 21782 ||||| | ||||| || || |||||||| ||||| || |||||||| ||||| |||||| Sbjct 772 AAGATTAAACGACCGAAGTAACCGTGAGCTGCAACGATGTTGTAAGTTTCTTCTTCTTGA 713 Query 21783 CCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGAATGAGTGACGAC 21842 || || |||||||| ||||| ||| | |||||| || |||||||| | || || Sbjct 712 CCGAATTTGTAACCGTAGTTAGTTGATTCGCTTTCAGTTGTTTCACGAATTAAAGAAGAA 653 Query 21843 GTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACGCCGGCCACACCC 21902 || || | |||||||||||| ||||| ||| ||||||||||| || || ||||| Sbjct 652 GTTACTAATGAACCGTGCATAGCTGAGAATAAAGAACCACCAAATACACCAGCAACACCA 593 Query 21903 AGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGCATGTAGTTG 21962 |||||| || || ||||| | ||| ||||||||||| ||||| || | |||| ||||| Sbjct 592 GCCATGTGGAATGGGTGCATTAAAATGTTGTGCTCAGCTTGGAATACTAACATGAAGTTG 533 Query 21963 AAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCAAACGGATAA 22022 || || || || || || || |||||| ||||||| || || || || |||| || || Sbjct 532 AAAGTACCAGAAATACCTAAAGGCATACCATCAGAGAATGAACCTTGACCAATTGGGTAT 473 Query 22023 ACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGATCCAGGGC 22082 || | ||| || |||| || || || || ||||||||| | || || |||||||| || Sbjct 472 ACTAAGAATACTGCAGAAGCTGCTGCTACTGGAGCAGAGAAAGCTACGAAGATCCAAGGA 413 Query 22083 CTCATCCCTAGTCGATA-GCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAAT 22141 | ||| |||| || || | ||| |||||| || || |||||||||| || || | Sbjct 412 CGCATACCTAAACGGTAAGATAA-TTCCCATTCACGACCCATGTAAGATGCTACTCCTAA 354 Query 22142 GAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCATTCATCAAGTGT 22201 | |||||| | ||| | | |||| | ||||| |||||||| | ||| ||||| | || Sbjct 353 TAAGAAGTGACAAACGATTAATTGGTAAGGACCACCGTTGTATAACCACTCATCGATTGA 294 Query 22202 AGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTCGGAACGACGGC 22261 ||| ||||||||||||||||||||||| | ||||| || ||| || || | || || Sbjct 293 AGCTGCTTCCCAAATTGGGTAGAAGTGCATACCGATAGCGTTAGAACTAGGGATAACTGC 234 Query 22262 TCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCTCGGATTCCATC 22321 || || |||||||||||||| || || | || || || || || || ||||| ||||| Sbjct 233 ACCAGAGATGATGTTGTTACCGTATAATAATGAACCTGCTACTGGCTCACGGATACCATC 174 Query 22322 GATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAG 22365 ||| ||||| || || || | | || ||||| || |||||| Sbjct 173 GATATCAACTGGAGGAGCTGCGATGAATGCGATGATGTAACAAG 130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146192311516080