Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1514 170 1e-37 >seq1514 Length=8380 Score = 170 bits (188), Expect = 1e-37 Identities = 457/686 (67%), Gaps = 21/686 (3%) Strand=Plus/Minus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || |||||||||||| || |||||||| || ||||| | ||| | || | ||||||||| Sbjct 3764 CTTCATAAATAAATCAGGTATCCACATGGCGTAAAAAAGATCACGAGCACGCATTTCTTC 3705 Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049 ||| ||||| || || || | | || | ||||||| ||| | ||||| || || || Sbjct 3704 TTTACCGTGGTTTTTCTTCAATTGCAAAAGCTCAAAAACATCGGCATGCCAAGGCTCCAA 3645 Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109 ||| || ||||| || || | || || || || |||||||| || | || || || Sbjct 3644 ATATATGGCAAATGAGCCCTTGCGCTTGCCACCTCCCTGATCTACATAGCGAGCGGTATC 3585 Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169 |||||| || ||||||||| | || || ||||| || ||||| | | || | Sbjct 3584 ATTGAATACCCGCAACATTGGTATTATGCCGTTTGAAGTGCCATTTGTACCTTTTATATA 3525 Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATA--CCGATTCCACCAGCCCATTTTGAA 26227 || || || | || | || | | ||| || || || ||||| ||| ||| ||| Sbjct 3524 CGAACCAGTGGCCCTTACAT--TATGTATGCTTAGGCCAATACCACCCGCCGATTGTGAT 3467 Query 26228 ATAGCTGCACAAT-CTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCC 26286 || ||||| | || || ||||||| |||| || | ||| || ||||||| Sbjct 3466 ATTTTGGCACATTGCTTTAA-TGTATCGTAAATACCATCTATTGAGTCGTCTTTCATGGT 3408 Query 26287 TAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGT 26346 ||||||||| || || |||| || | | | ||| |||| ||| |||||||| || || Sbjct 3407 TAATAAAAAGCATGACGATAGCTGTGGCTTTGGTGTACCTGCATTGAATAATGTGGGAGT 3348 Query 26347 AGCATGAGTATAATATCCTTCACTCAAAG--CTGTATAAGTTTCAAGAACTTCATCGATA 26404 ||||| ||| | ||| | || |||| |||| ||||||| | |||||| Sbjct 3347 GGCATGGGTAAACCATC--GCTCTGAAAGTAAATTATAGGTTTCAATGGCCGAGTCGATA 3290 Query 26405 T-TGTA--ATTACTAACTTCAATAGCTGTTCTTAACCACATATATTGAGGTCGTTCAATT 26461 | | || || | || || | |||| | | ||||| || || ||||| | Sbjct 3289 TCTATACCATGAATACCT---ACAGCTACACGCATGAGCATATGCTGTGGGCGTTC---T 3236 Query 26462 ACATTATTTTCCGCATCTCTAATCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAA 26521 | ||||| | || | | | | ||| |||||||| | ||||| || ||||||||| Sbjct 3235 GCTATATTTCCATCAATTTTTAAAAGATATGATTTTTCGAGTGTTTTAAAGCCAAAATAA 3176 Query 26522 TCATGATTGAAATCTCTTTTTTGTACTATAATTGAATCAAGAAATTCTCTATATTTTTCT 26581 |||| | |||||||| | | || |||| | || || || ||| | || ||||| | Sbjct 3175 TCATAACCAAAATCTCTATCATATATTATAGTAGAGTCGAGCAATGCAGCATGTTTTTTT 3116 Query 26582 ACAA-ATGATGTGAATCTTTTAGAAA 26606 |||| || || | |||||| |||| Sbjct 3115 ACAACATCATATACTTCTTTT-GAAA 3091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253012133653700