Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq6036 758 0.0
seq3878 93.3 6e-14
seq1443 84.2 3e-11
>seq6036
Length=8020
Score = 758 bits (840), Expect = 0.0
Identities = 764/993 (77%), Gaps = 0/993 (0%)
Strand=Plus/Minus
Query 26725 TCAGCAGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAAT 26784
||| | | ||| | ||| ||||| || || || ||||| | |||||| || || || |
Sbjct 1033 TCACCTGAAGCTAAATCTAATGGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATA 974
Query 26785 CCAAGACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCA 26844
|| | | |||||||||| | | || ||||||||||||| |||||||| ||||||||
Sbjct 973 CCTAAATCAGCACGGTTAACGATATCAGCCCAAGTGTTGATTACACGACCTTGTGAATCT 914
Query 26845 ATCACAGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGT 26904
| || || || ||||||||||||||||| | ||||| ||||| || | ||| |
Sbjct 913 ACAACTGATTGGTTGAAGTTGAAACCGTTTAAGTTGAACGCCATAGTACTAATACCCATA 854
Query 26905 GCGGTGAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAG 26964
|| || |||||||| || | ||| |||||| ||| | ||||||||| || | ||| |||
Sbjct 853 GCAGTTAACCAGATACCTAAAACTGGCCATAAAGCTAAGAAGAAGTGTAAAGCACGAGAG 794
Query 26965 TTGTTGAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATG 27024
|||||||||||||| ||||||||||| |||||||||||||| || || ||||| ||||||
Sbjct 793 TTGTTGAATGAAGCGTATTGGAAGATTAAACGACCGAAGTAACCGTGAGCTGCAACGATG 734
Query 27025 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTC 27084
||||| || ||||||||||||||||| || ||||| ||||| ||| || |||||||
Sbjct 733 TTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCGTAGTTAGTTGATTCGCTTTCAGTT 674
Query 27085 GTCTCACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCA 27144
|| ||||| | | ||||| || || | ||||||||||| ||||| | ||| |||
Sbjct 673 GTTTCACGAATTAAAGAAGAAGTTACTAATGAACCGTGCATAGCTGAGAATAAAGAACCA 614
Query 27145 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCC 27204
|| ||||| ||||||||||| ||||||||| |||||||| | || ||||| || ||
Sbjct 613 CCAAATACACCAGCAACACCAGCCATGTGGAATGGGTGCATTAAAATGTTGTGCTCAGCT 554
Query 27205 TGGAATACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAA 27264
|||||||| | |||| |||| ||||||||||| ||||| | ||||||| |||| |||||
Sbjct 553 TGGAATACTAACATGAAGTTGAAAGTACCAGAAATACCTAAAGGCATACCATCAGAGAAT 494
Query 27265 GAACCTTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAA 27324
||||||||||| | || || || | |||||||||| || || || |||||||||||
Sbjct 493 GAACCTTGACCAATTGGGTATACTAAGAATACTGCAGAAGCTGCTGCTACTGGAGCAGAG 434
Query 27325 TATGCTACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCC 27384
| ||||| ||||||| ||||||||||||||||| || || | |||||| ||||| |||
Sbjct 433 AAAGCTACGAAGATCCAAGGACGCATACCTAAACGGTAAGATAATTCCCATTCACGACCC 374
Query 27385 ATATAAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTA 27444
|| |||| | || | | |||||| | || | | |||| |||||||||||||
Sbjct 373 ATGTAAGATGCTACTCCTAATAAGAAGTGACAAACGATTAATTGGTAAGGACCACCGTTG 314
Query 27445 TACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCA 27504
|| ||||||||||||| ||| ||||||||||| |||||||||||||| | |||||| ||
Sbjct 313 TATAACCACTCATCGATTGAAGCTGCTTCCCAAATTGGGTAGAAGTGCATACCGATAGCG 254
Query 27505 TTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCA 27564
|| ||||| |||| |||||||||||| ||||||||||| || || | | |||||| ||
Sbjct 253 TTAGAACTAGGGATAACTGCACCAGAGATGATGTTGTTACCGTATAATAATGAACCTGCT 194
Query 27565 ACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAAG 27624
|| || ||||| ||||| || ||||| || || || |||||||||||||||| ||| |
Sbjct 193 ACTGGCTCACGGATACCATCGATATCAACTGGAGGAGCTGCGATGAATGCGATGATGTAA 134
Query 27625 CAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAA 27684
|| |||||||| ||| | ||| |||| ||| | ||| |||||||| | || |||
Sbjct 133 CAAGAAGTTGCTGTTAATAATGTAGGGAACATTAAACAACCAAACCAACCGATGTATAAA 74
Query 27685 CGGTTGTTAGTTGATGTCACCCACTCACAGAAA 27717
||||| | ||| || | ||| ||||||||
Sbjct 73 CGGTTTTCAGTACTAGTAATCCAACCACAGAAA 41
>seq3878
Length=2387
Score = 93.3 bits (102), Expect = 6e-14
Identities = 250/379 (66%), Gaps = 4/379 (1%)
Strand=Plus/Plus
Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847
|| ||||| || || || || || | || || || || ||||| | |||| |||
Sbjct 59 CCGGTGGCGATGACGAAGTCTTCCGCTTGTTGCTGCTGCAGCATCAGCCACTGCATCTCA 118
Query 47848 ACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAG 47907
|| ||||| |||| || |||||||| || || || || || || || | | ||
Sbjct 119 ACGTAATCCTTGGCGTGGCCCCAGTCGCGCTTGGCGTCGAGGTTGCCCAGGAACAGGCAT 178
Query 47908 TCTTGCTTACCTTCAGA-GATTGCTTTT-AATGCTCTTGTAATCTTACGAGTTACAAAAG 47965
| ||| | || ||| || ||| || || | || ||||| || || || || |
Sbjct 179 TTCTGCGTGCC--CAGGTGAATGCGGGCCAAGGCGCGGGTGATCTTGCGCGTGACGAAGG 236
Query 47966 TTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGT 48025
|||| || || |||| |||||||| || || | || || | ||||||||||| ||||
Sbjct 237 TTTCGCCGCGGATTGGCGATTCATGGTTGAACAAGATGCCGTTGCAGGCATACATGCCGT 296
Query 48026 ATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAG 48085
| | || || |||||| |||||||| ||||| | || || || |||| ||
Sbjct 297 AAGCCTCGCGGTAGTTCACCGTGATCCAGTAGCCATACATCTTGGCCACGGCATAGGGGC 356
Query 48086 AACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTT 48145
|| || || || || |||||||| ||| || || |||||| || || || |
Sbjct 357 TGCGCGGGTAAAAGGGCGTGGTCTCGCGCTGCGGCACTTCCTGCACCAGGCCGTAGAGCT 416
Query 48146 CACTGGTGGATGCTTGATA 48164
| |||||| ||||||||
Sbjct 417 CGGAGGTGGAGGCTTGATA 435
>seq1443
Length=15309
Score = 84.2 bits (92), Expect = 3e-11
Identities = 73/88 (83%), Gaps = 2/88 (2%)
Strand=Plus/Plus
Query 53484 GCGGAGAGGGTGAGATTCGAACTCACGGAG-GCTTTCACCT-CGCTGGTTTTCAAGACCA 53541
||||| |||||| ||||||||| ||||| | |||| |||| ||| |||||||||||||
Sbjct 12836 GCGGACAGGGTGGGATTCGAACCCACGGTGAGCTTGCACCCACGCCGGTTTTCAAGACCG 12895
Query 53542 GAGCCATAAACCACTCGACCACCTCTCC 53569
| ||| |||||| |||| |||||| |||
Sbjct 12896 GTGCCTTAAACCGCTCGGCCACCTGTCC 12923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665419232407520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |