Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq6036 524 2e-144 >seq6036 Length=8020 Score = 524 bits (580), Expect = 2e-144 Identities = 648/884 (73%), Gaps = 2/884 (0%) Strand=Plus/Plus Query 41322 CTTGTTTTATTATCGCCTTTGTTGGCGCACCACCTGTTGACATCGATGGAATCCGAGAAC 41381 |||||| || ||||| || | | || || || ||||| |||||||| ||||| || | Sbjct 130 CTTGTTACATCATCGCATTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGC 189 Query 41382 CCGTCGCTGGCTCCCTGTTGTATGGTAACAACATCATATCAGGAGCCGTCGTTCCGAGCA 41441 | || || || || | || || |||||||||||||| || || || || | || || Sbjct 190 CAGTAGCAGGTTCATTATTATACGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTT 249 Query 41442 GTAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTGCTACACTTGATGAATGGC 41501 ||| || ||||| | ||||||||||||||||||||||| ||| || | ||||| ||| Sbjct 250 CTAACGCTATCGGTATGCACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGT 309 Query 41502 TGTACAACGGCGGTCCATTCCAACTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTT 41561 | |||||||| ||||| | |||| | | ||| | |||||| | | || || ||| Sbjct 310 TATACAACGGTGGTCCTTACCAATTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCTT 369 Query 41562 ACATGGGACGAGAGTGGGAACTTAGC-TATCGACTAGGGATGAGGCCCTGGATCTTTGTT 41620 ||||||| || || |||||| ||| | || || |||| ||| | || |||||||| || Sbjct 370 ACATGGGTCGTGAATGGGAA-TTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTA 428 Query 41621 GCGTACTCTGCTCCTGTCGCCGCTGCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAG 41680 || | ||||||||| || || || || |||| || ||| | || || || |||| || Sbjct 429 GCTTTCTCTGCTCCAGTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAA 488 Query 41681 GGCTCTTTTTCTGATGCTATGCCCTTGGGGATATCCGGCACCTTCAACTACATGCTGGTG 41740 || || || ||||||| |||||| || || || || || || ||||||| |||| | || Sbjct 489 GGTTCATTCTCTGATGGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTA 548 Query 41741 TTCCAGGCTGAGCACAATATTCTTATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTA 41800 ||||| ||||||||||| ||| | ||||| || || |||||| ||||| || || ||| Sbjct 549 TTCCAAGCTGAGCACAACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTA 608 Query 41801 TTTGGTGGGAGTTTGTTCTCTGCTATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGT 41860 |||||||| ||| ||||| |||||||||||| | || || || || | |||||| Sbjct 609 TTTGGTGGTTCTTTATTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGT 668 Query 41861 GAGACGACTGAAGAGGTTTCACAGAACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACT 41920 || || |||||| | ||| ||||| |||||||| || |||||||| ||||| ||| Sbjct 669 GAAACAACTGAAAGCGAATCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACT 728 Query 41921 TACAATATTGTTGCTGCTCACGGCTATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTT 41980 ||||| || ||||| |||||||| || || ||||| | ||||||||||| ||| || Sbjct 729 TACAACATCGTTGCAGCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTC 788 Query 41981 AATAATTCCCGTAGTCTTCATTTCTTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTT 42040 || || || ||| | | || ||||| | ||| ||||| ||| ||||||| ||||| Sbjct 789 AACAACTCTCGTGCTTTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTA 848 Query 42041 GCTGCGCTTGGCGTGTCTACCATGGCTTTCAACTTGAATGGTTTCAACTTTAACCAATCT 42100 |||| | || | ||| ||||| |||||||| || ||||||||||| |||||||| Sbjct 849 ACTGCTATGGGTATTAGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCA 908 Query 42101 CTGCTAGCTGCTGATGGACAGGTGATCAACACCTGGGCTGACATTCTTAACCGTGCCAAC 42160 | ||| | | | || | || |||||||| |||||||| || |||||||||| | Sbjct 909 GTTGTAGATTCACAAGGTCGTGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGAT 968 Query 42161 CTTGGCTTTGAGGTGATGCATGAGCGGAACGCACACAACTTCCC 42204 | || | || || ||||| || || ||||| ||||||||||| Sbjct 969 TTAGGTATGGAAGTAATGCACGAACGTAACGCGCACAACTTCCC 1012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146198710829344