Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq6036 535 1e-147 >seq6036 Length=8020 Score = 535 bits (592), Expect = 1e-147 Identities = 646/875 (74%), Gaps = 8/875 (1%) Strand=Plus/Plus Query 42389 TCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCT 42448 |||| ||||| || || ||||| || || || ||||| || ||||| || || | || | Sbjct 142 TCGCATTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTT 201 Query 42449 CTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTG 42508 | | | || || |||||||||||||||||||| || | ||||| |||||| || | Sbjct 202 CATTATTATACGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCG 261 Query 42509 GACTACATTTGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCG 42568 | | || || || | || |||||||| | | | || || ||| | ||||| || | Sbjct 262 GTATGCACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTG 321 Query 42569 GACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCG 42628 | ||||| || | |||| | |||||| | | || | |||||| |||| || | Sbjct 322 GTCCTTACCAATTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCTTACATGGGTCGTG 381 Query 42629 AATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCC 42688 |||||||| | || ||||| | || ||| | || |||||||| || |||| |||||| | Sbjct 382 AATGGGAATTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTC 441 Query 42689 CTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAG 42748 | || || ||||| ||||||| ||| | || || ||| |||| |||||||| || || | Sbjct 442 CAGTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTG 501 Query 42749 ATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAAC 42808 |||| |||||| | || ||||| ||||| |||||||||||||| || ||||| ||||| | Sbjct 502 ATGGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGC 561 Query 42809 ATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGT 42868 | |||||| | ||||| || ||||| ||| ||||||||| || ||||||||||| || | Sbjct 562 ACAACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTT 621 Query 42869 TGTTCTCAGCTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAA 42928 | |||||||||||||| ||| | || || |||||| | | |||||||| ||||||| Sbjct 622 TATTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAA 681 Query 42929 ACGAAAGCCAA--AATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGT 42986 |||| ||| || || || ||||| ||||||||||| || || ||||| ||||| || Sbjct 682 GCGAA--TCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGT 739 Query 42987 TGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCG 43046 |||||| || |||||||| || || | ||||||||||| || || || || || ||| Sbjct 740 TGCAGCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCG 799 Query 43047 CTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGG 43106 |||| |||||||| | || ||||| ||| | || || ||||| ||| || | || Sbjct 800 TGCTTTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGG 859 Query 43107 CGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAA 43166 | |||||||||||||| ||||| || ||||| ||||| ||||||||| |||| ||| Sbjct 860 TATTAGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGAT-- 917 Query 43167 TCAGAA--TCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTT 43224 ||| || || ||| ||| |||||||||||||| | || ||||| | | || | Sbjct 918 TCACAAGGTCGTGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATG 977 Query 43225 GAGGTGATGCACGAGCGGAATGCACATAACTTCCC 43259 || || |||||||| || || || || |||||||| Sbjct 978 GAAGTAATGCACGAACGTAACGCGCACAACTTCCC 1012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143517398571728