Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= NC_020874.1
Length=46198
Score E
Sequences producing significant alignments: (Bits) Value
seq6036 489 5e-134
>seq6036
Length=8020
Score = 489 bits (542), Expect = 5e-134
Identities = 728/1030 (71%), Gaps = 2/1030 (0%)
Strand=Plus/Minus
Query 25840 TGGGGCTGATAGTGCAACTTGTGTTGACTCAGATGATGCTAAGTCAAGTGGAAAGTTATG 25899
||| |||| || |||||| || | ||| ||| ||||| || | ||| ||||| ||
Sbjct 1061 TGGAGCTGTTAAAGCAACTGGTAATACTTCACCTGAAGCTAAATCTAATGGGAAGTTGTG 1002
Query 25900 AGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTAGCTCGGTTTAATACATCAGCCCA 25959
|| ||||| |||||||| ||||| | || | | ||| ||||| | | |||||||||
Sbjct 1001 CGCGTTACGTTCGTGCATTACTTCCATACCTAAATCAGCACGGTTAACGATATCAGCCCA 942
Query 25960 TGTAGGTATTATCTTTCCATTAACATCTACTACTGACTGGTTAAAGTTAAAACCATTTAG 26019
|| |||| || | |||||| ||||| ||||| ||||| ||||| ||||
Sbjct 941 AGTGTTGATTACACGACCTTGTGAATCTACAACTGATTGGTTGAAGTTGAAACCGTTTAA 882
Query 26020 GTTAAATGCCATTGTGCAGATACCCATAGATGTCAGCCATATGCCAACAACCGGCCAAGT 26079
||| || ||||| || | |||||||||| || | ||| || || | ||| |||||
Sbjct 881 GTTGAACGCCATAGTACTAATACCCATAGCAGTTAACCAGATACCTAAAACTGGCCATAA 822
Query 26080 AGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAACTCGCATACTGAAAAATTAATCT 26139
||| | ||||| || | || ||| ||| || || || || || || ||||| |
Sbjct 821 AGCTAAGAAGAAGTGTAAAGCACGAGAGTTGTTGAATGAAGCGTATTGGAAGATTAAACG 762
Query 26140 CCCAAAGTACCCGTGTGCAGCGACAATATTATATGTCTCTTCATCTTGCCCAAACTTATA 26199
|| ||||| ||||| || || || || || || || ||||| ||||| || || || ||
Sbjct 761 ACCGAAGTAACCGTGAGCTGCAACGATGTTGTAAGTTTCTTCTTCTTGACCGAATTTGTA 702
Query 26200 GCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCAATAAGTGAGGAAGTAACCAAACT 26259
|| || || ||| | || || ||||| ||| | || ||||| || ||
Sbjct 701 ACCGTAGTTAGTTGATTCGCTTTCAGTTGTTTCACGAATTAAAGAAGAAGTTACTAATGA 642
Query 26260 TCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACCCCAGCAACACCAGCCATATGGAA 26319
||||||||||| | ||| | || ||||| || || ||||||||||||||||| |||||
Sbjct 641 ACCGTGCATAGCTGAGAATAAAGAACCACCAAATACACCAGCAACACCAGCCATGTGGAA 582
Query 26320 TGGGTGCATGAGTATATTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCAGA 26379
||||||||| | || || || || ||||||||||| ||||| ||||| |||||||||||
Sbjct 581 TGGGTGCATTAAAATGTTGTGCTCAGCTTGGAATACTAACATGAAGTTGAAAGTACCAGA 522
Query 26380 GATACCAAGAGGCATTCCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAACAC 26439
||||| | |||||| |||||| || ||||| || | || || |||||||| ||
Sbjct 521 AATACCTAAAGGCATACCATCAGAGAATGAACCTTGACCAATTGGGTATACTAAGAATAC 462
Query 26440 TGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACAAATATCCATGGTCTCATTCCTAG 26499
||| |||||| | || ||| || | | || || || ||||| || | ||| ||||
Sbjct 461 TGCAGAAGCTGCTGCTACTGGAGCAGAGAAAGCTACGAAGATCCAAGGACGCATACCTAA 402
Query 26500 TCTGTAAGATAGTTCCCACTGTCTCCCTGCATATGCTGCTACTCCTATTAAGAAGTGGAA 26559
| |||||||| |||||| | | || || | ||||||||||| ||||||||| |
Sbjct 401 ACGGTAAGATAATTCCCATTCACGACCCATGTAAGATGCTACTCCTAATAAGAAGTGACA 342
Query 26560 GATAATGAGTTGATATGGTCCGCCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCA 26619
| || | ||| || || || || ||||||| |||||| || | || | ||||||||
Sbjct 341 AACGATTAATTGGTAAGGACCACCGTTGTATAACCACTCATCGATTGAAGCTGCTTCCCA 282
Query 26620 GATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAGGGGACGACTGCTCCTGATATTAT 26679
|| ||||| || || | ||||| |||||||| |||| ||||| || || || ||
Sbjct 281 AATTGGGTAGAAGTGCATACCGATAGCGTTAGAACTAGGGATAACTGCACCAGAGATGAT 222
Query 26680 ATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCACGTATGCCATCTATATCTACAGG 26739
||||| ||||| | ||| || || | ||||||||||| || ||||| ||||| || ||
Sbjct 221 GTTGTTACCGTATAATAATGAACCTGCTACTGGCTCACGGATACCATCGATATCAACTGG 162
Query 26740 CGGTGCTGCGATGAAGGCAAGTATAAAACATGTAGTGGCTGCGAGTAA-GCAGGGTATCA 26798
|| ||||||||||| || | || |||| | ||| |||| | ||| | |||| |
Sbjct 161 AGGAGCTGCGATGAATGCGATGATGTAACAAGAAGTTGCTGTTAATAATGTAGGGAACAT 102
Query 26799 TAAGCACCCCGAACCATCCCACATAGAGACGGTTCTCAGTACTTGTAACCCACTCACAAA 26858
||| || || ||||| || | || | |||||| |||||||| |||| ||| |||| |
Sbjct 101 TAAACA-ACCAAACCAACCGATGTATAAACGGTTTTCAGTACTAGTAATCCAACCACAGA 43
Query 26859 ACCTCTCCCA 26868
| | |||||
Sbjct 42 AACGTTCCCA 33
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147696150133120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |