Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq6036 489 5e-134 >seq6036 Length=8020 Score = 489 bits (542), Expect = 5e-134 Identities = 728/1030 (71%), Gaps = 2/1030 (0%) Strand=Plus/Minus Query 25840 TGGGGCTGATAGTGCAACTTGTGTTGACTCAGATGATGCTAAGTCAAGTGGAAAGTTATG 25899 ||| |||| || |||||| || | ||| ||| ||||| || | ||| ||||| || Sbjct 1061 TGGAGCTGTTAAAGCAACTGGTAATACTTCACCTGAAGCTAAATCTAATGGGAAGTTGTG 1002 Query 25900 AGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTAGCTCGGTTTAATACATCAGCCCA 25959 || ||||| |||||||| ||||| | || | | ||| ||||| | | ||||||||| Sbjct 1001 CGCGTTACGTTCGTGCATTACTTCCATACCTAAATCAGCACGGTTAACGATATCAGCCCA 942 Query 25960 TGTAGGTATTATCTTTCCATTAACATCTACTACTGACTGGTTAAAGTTAAAACCATTTAG 26019 || |||| || | |||||| ||||| ||||| ||||| ||||| |||| Sbjct 941 AGTGTTGATTACACGACCTTGTGAATCTACAACTGATTGGTTGAAGTTGAAACCGTTTAA 882 Query 26020 GTTAAATGCCATTGTGCAGATACCCATAGATGTCAGCCATATGCCAACAACCGGCCAAGT 26079 ||| || ||||| || | |||||||||| || | ||| || || | ||| ||||| Sbjct 881 GTTGAACGCCATAGTACTAATACCCATAGCAGTTAACCAGATACCTAAAACTGGCCATAA 822 Query 26080 AGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAACTCGCATACTGAAAAATTAATCT 26139 ||| | ||||| || | || ||| ||| || || || || || || ||||| | Sbjct 821 AGCTAAGAAGAAGTGTAAAGCACGAGAGTTGTTGAATGAAGCGTATTGGAAGATTAAACG 762 Query 26140 CCCAAAGTACCCGTGTGCAGCGACAATATTATATGTCTCTTCATCTTGCCCAAACTTATA 26199 || ||||| ||||| || || || || || || || ||||| ||||| || || || || Sbjct 761 ACCGAAGTAACCGTGAGCTGCAACGATGTTGTAAGTTTCTTCTTCTTGACCGAATTTGTA 702 Query 26200 GCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCAATAAGTGAGGAAGTAACCAAACT 26259 || || || ||| | || || ||||| ||| | || ||||| || || Sbjct 701 ACCGTAGTTAGTTGATTCGCTTTCAGTTGTTTCACGAATTAAAGAAGAAGTTACTAATGA 642 Query 26260 TCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACCCCAGCAACACCAGCCATATGGAA 26319 ||||||||||| | ||| | || ||||| || || ||||||||||||||||| ||||| Sbjct 641 ACCGTGCATAGCTGAGAATAAAGAACCACCAAATACACCAGCAACACCAGCCATGTGGAA 582 Query 26320 TGGGTGCATGAGTATATTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCAGA 26379 ||||||||| | || || || || ||||||||||| ||||| ||||| ||||||||||| Sbjct 581 TGGGTGCATTAAAATGTTGTGCTCAGCTTGGAATACTAACATGAAGTTGAAAGTACCAGA 522 Query 26380 GATACCAAGAGGCATTCCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAACAC 26439 ||||| | |||||| |||||| || ||||| || | || || |||||||| || Sbjct 521 AATACCTAAAGGCATACCATCAGAGAATGAACCTTGACCAATTGGGTATACTAAGAATAC 462 Query 26440 TGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACAAATATCCATGGTCTCATTCCTAG 26499 ||| |||||| | || ||| || | | || || || ||||| || | ||| |||| Sbjct 461 TGCAGAAGCTGCTGCTACTGGAGCAGAGAAAGCTACGAAGATCCAAGGACGCATACCTAA 402 Query 26500 TCTGTAAGATAGTTCCCACTGTCTCCCTGCATATGCTGCTACTCCTATTAAGAAGTGGAA 26559 | |||||||| |||||| | | || || | ||||||||||| ||||||||| | Sbjct 401 ACGGTAAGATAATTCCCATTCACGACCCATGTAAGATGCTACTCCTAATAAGAAGTGACA 342 Query 26560 GATAATGAGTTGATATGGTCCGCCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCA 26619 | || | ||| || || || || ||||||| |||||| || | || | |||||||| Sbjct 341 AACGATTAATTGGTAAGGACCACCGTTGTATAACCACTCATCGATTGAAGCTGCTTCCCA 282 Query 26620 GATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAGGGGACGACTGCTCCTGATATTAT 26679 || ||||| || || | ||||| |||||||| |||| ||||| || || || || Sbjct 281 AATTGGGTAGAAGTGCATACCGATAGCGTTAGAACTAGGGATAACTGCACCAGAGATGAT 222 Query 26680 ATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCACGTATGCCATCTATATCTACAGG 26739 ||||| ||||| | ||| || || | ||||||||||| || ||||| ||||| || || Sbjct 221 GTTGTTACCGTATAATAATGAACCTGCTACTGGCTCACGGATACCATCGATATCAACTGG 162 Query 26740 CGGTGCTGCGATGAAGGCAAGTATAAAACATGTAGTGGCTGCGAGTAA-GCAGGGTATCA 26798 || ||||||||||| || | || |||| | ||| |||| | ||| | |||| | Sbjct 161 AGGAGCTGCGATGAATGCGATGATGTAACAAGAAGTTGCTGTTAATAATGTAGGGAACAT 102 Query 26799 TAAGCACCCCGAACCATCCCACATAGAGACGGTTCTCAGTACTTGTAACCCACTCACAAA 26858 ||| || || ||||| || | || | |||||| |||||||| |||| ||| |||| | Sbjct 101 TAAACA-ACCAAACCAACCGATGTATAAACGGTTTTCAGTACTAGTAATCCAACCACAGA 43 Query 26859 ACCTCTCCCA 26868 | | ||||| Sbjct 42 AACGTTCCCA 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147696150133120