Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq6036 655 0.0 >seq6036 Length=8020 Score = 655 bits (726), Expect = 0.0 Identities = 741/987 (75%), Gaps = 8/987 (1%) Strand=Plus/Minus Query 40524 TCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATA 40583 ||| | |||||||| |||| || |||||||| |||||||| |||||||||||||||||| Sbjct 1033 TCACCTGAAGCTAAATCTAATGGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATA 974 Query 40584 CCTAGACTCTGT-CTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTC 40642 |||| | || | | ||||| | |||||||||||| || || ||| | | || Sbjct 973 CCTAAA-TCAGCACGGTTAACGATATCAGCCCAAGTGTTGATTACACGACCTTGTGAATC 915 Query 40643 TACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCAT 40702 ||| ||||| ||||| ||||| ||||| || | ||| || ||||||||| |||||||| Sbjct 914 TACAACTGATTGGTTGAAGTTGAAACCGTTTAAGTTGAACGCCATAGTACTAATACCCAT 855 Query 40703 GGAGGTAAGCCATATGCCAATAACCGGG---AAAGCACCAAGAAAGAAGTGTAGCGCACG 40759 | || | ||| || || | ||| || ||||| ||||| |||||||| ||||| Sbjct 854 AGCAGTTAACCAGATACCTAAAACTGGCCATAAAGCT--AAGAA-GAAGTGTAAAGCACG 798 Query 40760 GCTATTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTAC 40819 |||||||||||||| ||||| || |||| | ||| ||||||||||| || || || Sbjct 797 AGAGTTGTTGAATGAAGCGTATTGGAAGATTAAACGACCGAAGTAACCGTGAGCTGCAAC 738 Query 40820 GATGTTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTC 40879 |||||| ||||| || |||| ||||| || || || |||||||| |||||| |||| Sbjct 737 GATGTTGTAAGTTTCTTCTTCTTGACCGAATTTGTAACCGTAGTTAGTTGATTCGCTTTC 678 Query 40880 CGTGGTCTCCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGC 40939 || || || ||||| | || ||||| || | ||||||||||| | || |||| Sbjct 677 AGTTGTTTCACGAATTAAAGAAGAAGTTACTAATGAACCGTGCATAGCTGAGAATAAAGA 618 Query 40940 ACCACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTC 40999 ||||||||| || || ||||| || ||| |||||||||||||| | ||||||||| || Sbjct 617 ACCACCAAATACACCAGCAACACCAGCCATGTGGAATGGGTGCATTAAAATGTTGTGCTC 558 Query 41000 TGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGA 41059 |||||||| || |||||||||||||| || ||| || |||||||||||||||||||| Sbjct 557 AGCTTGGAATACTAACATGAAGTTGAAAGTACCAGAAATACCTAAAGGCATACCATCAGA 498 Query 41060 GAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGC 41119 ||| ||||| ||||| | ||| || ||||||||||| || |||||||| | |||||| Sbjct 497 GAATGAACCTTGACCAATTGGGTATACTAAGAATACTGCAGAAGCTGCTGCTACTGGAGC 438 Query 41120 TGTGTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCT 41179 | | | || || || ||||| || | |||||||| | ||| || | |||||| | | Sbjct 437 AGAGAAAGCTACGAAGATCCAAGGACGCATACCTAAACGGTAAGATAATTCCCATTCACG 378 Query 41180 ACCAGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCC 41239 ||| ||| | ||||||||||| ||| |||||| | || || | ||| || || || || Sbjct 377 ACCCATGTAAGATGCTACTCCTAATAAGAAGTGACAAACGATTAATTGGTAAGGACCACC 318 Query 41240 GTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGAT 41299 |||||||| |||||| || | || | |||||||| ||||||||||| || | ||||| Sbjct 317 GTTGTATAACCACTCATCGATTGAAGCTGCTTCCCAAATTGGGTAGAAGTGCATACCGAT 258 Query 41300 TGCGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCC 41359 |||||||| || || | || || ||||| || || ||||| ||||| | ||| || || Sbjct 257 AGCGTTAGAACTAGGGATAACTGCACCAGAGATGATGTTGTTACCGTATAATAATGAACC 198 Query 41360 GGAAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTAT 41419 | || |||||||| || ||||| ||||| || || || |||||||| || ||||| || Sbjct 197 TGCTACTGGCTCACGGATACCATCGATATCAACTGGAGGAGCTGCGATGAATGCGATGAT 138 Query 41420 GAAACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTA 41479 | |||| | || || |||| ||||| || | ||||| |||||||||||| | ||| Sbjct 137 GTAACAAGAAGTTGCTGTTAATAATGTAGGGAACATTAAACAACCAAACCAACCGATGTA 78 Query 41480 TAGGCGGTTGTCGGTGCTAGTGACCCA 41506 || ||||| || || ||||| | ||| Sbjct 77 TAAACGGTTTTCAGTACTAGTAATCCA 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143686980373224