Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq6036 711 0.0 >seq6036 Length=8020 Score = 711 bits (788), Expect = 0.0 Identities = 715/929 (77%), Gaps = 0/929 (0%) Strand=Plus/Minus Query 67374 GGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCTGCTCTGTTAAGG 67433 ||||||||||| |||||||| |||||||| |||||||| || | | || | ||||| | Sbjct 1012 GGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATACCTAAATCAGCACGGTTAACG 953 Query 67434 ATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGATTGGTTGAAGTTG 67493 || || |||||||| || || ||| || || || || ||||||||||||||| Sbjct 952 ATATCAGCCCAAGTGTTGATTACACGACCTTGTGAATCTACAACTGATTGGTTGAAGTTG 893 Query 67494 AAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAACCAGATGCAGACC 67553 |||||||| | |||||| |||||||| | |||||| ||||| |||||||| | | Sbjct 892 AAACCGTTTAAGTTGAACGCCATAGTACTAATACCCATAGCAGTTAACCAGATACCTAAA 833 Query 67554 ACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAAGATGCATACTGG 67613 || || || ||| | ||||||||| | | | ||||||||||| || || || ||| Sbjct 832 ACTGGCCATAAAGCTAAGAAGAAGTGTAAAGCACGAGAGTTGTTGAATGAAGCGTATTGG 773 Query 67614 AAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGT 67673 ||||| || ||||||||||| || ||||| ||||| ||||||||||| ||||||||||| Sbjct 772 AAGATTAAACGACCGAAGTAACCGTGAGCTGCAACGATGTTGTAAGTTTCTTCTTCTTGA 713 Query 67674 CCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAGAGAAGAA 67733 ||||| |||||||||||||| ||| || ||||| ||||| | || | ||||||| Sbjct 712 CCGAATTTGTAACCGTAGTTAGTTGATTCGCTTTCAGTTGTTTCACGAATTAAAGAAGAA 653 Query 67734 GTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCTACTCCA 67793 || || | |||||||||||||| || | |||||||| |||||||| || || ||| Sbjct 652 GTTACTAATGAACCGTGCATAGCTGAGAATAAAGAACCACCAAATACACCAGCAACACCA 593 Query 67794 AGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGTAGTTA 67853 ||| |||||||||||||| | ||||||||||| |||||||| || |||||| |||| Sbjct 592 GCCATGTGGAATGGGTGCATTAAAATGTTGTGCTCAGCTTGGAATACTAACATGAAGTTG 533 Query 67854 AAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAAGGATAG 67913 ||||||||||||||||| | |||||| | |||||||| ||||||||||| | || || Sbjct 532 AAAGTACCAGAAATACCTAAAGGCATACCATCAGAGAATGAACCTTGACCAATTGGGTAT 473 Query 67914 ACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACACAGATCCAAGGA 67973 || ||||| || || | ||||| | |||||||||||| | ||||| ||||||||||| Sbjct 472 ACTAAGAATACTGCAGAAGCTGCTGCTACTGGAGCAGAGAAAGCTACGAAGATCCAAGGA 413 Query 67974 CGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAGTATGCTGTGATTCCGATA 68033 |||||||| | ||||||||| | |||||| | |||||| ||| | || | ||| | Sbjct 412 CGCATACCTAAACGGTAAGATAATTCCCATTCACGACCCATGTAAGATGCTACTCCTAAT 353 Query 68034 AGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATACAACCACTCATCTAGAGTT 68093 | |||||| | || | | |||| |||| ||||| || || ||||||||||| | | Sbjct 352 AAGAAGTGACAAACGATTAATTGGTAAGGACCACCGTTGTATAACCACTCATCGATTGAA 293 Query 68094 GCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTAGGAACAACAGCA 68153 ||||||||||| || || |||||||| | |||||| ||||| |||||||| | ||| ||| Sbjct 292 GCTGCTTCCCAAATTGGGTAGAAGTGCATACCGATAGCGTTAGAACTAGGGATAACTGCA 233 Query 68154 CCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCTCTGATACCATCG 68213 ||||| ||||||||||||||||| | | |||||||| || || || | |||||||||| Sbjct 232 CCAGAGATGATGTTGTTACCGTATAATAATGAACCTGCTACTGGCTCACGGATACCATCG 173 Query 68214 ATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAAGTTGCTGCTGCGAGCAAG 68273 |||||||||||||| ||||| |||||||| |||||| | |||| | ||||| | || Sbjct 172 ATATCAACTGGAGGAGCTGCGATGAATGCGATGATGTAACAAGAAGTTGCTGTTAATAAT 113 Query 68274 CAAGGAATCATCAACACACCGAACCAACC 68302 ||| | ||| || ||| |||||||| Sbjct 112 GTAGGGAACATTAAACAACCAAACCAACC 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566883163313760