Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq6036 699 0.0 >seq6036 Length=8020 Score = 699 bits (774), Expect = 0.0 Identities = 744/978 (76%), Gaps = 14/978 (1%) Strand=Plus/Minus Query 67855 GGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCAGCGCGGTTGAGA 67914 ||||||||||| |||||||| || ||||| ||||||||||| ||| |||| ||||| | Sbjct 1012 GGGAAGTTGTGCGCGTTACGTTCGTGCATTACTTCCATACCTAAATCAGCACGGTTAACG 953 Query 67915 ACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACT-----ATCAAGGATAGACTGGTTGA 67969 | || ||||| || | || |||| || || ||| | | || ||||||| Sbjct 952 ATATCAGCCCAAGT--GTTGA---TTACACGACCTTGTGAATCTACAACTGATTGGTTGA 898 Query 67970 AGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAACCAGATAC 68029 |||||||||| || | |||||| ||||| || |||| ||| | ||||| |||||||||| Sbjct 897 AGTTGAAACCGTTTAAGTTGAACGCCATAGTACTAATACCCATAGCAGTTAACCAGATAC 838 Query 68030 CAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGATGCAT 68089 | | || |||||| ||| | ||||||||| | | ||| ||||||||||| || || | Sbjct 837 CTAAAACTGGCCATAAAGCTAAGAAGAAGTGTAAAGCACGAGAGTTGTTGAATGAAGCGT 778 Query 68090 ACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTCTT 68149 | |||||||| | |||||||||||| || || || ||||| ||||||||||| ||||||| Sbjct 777 ATTGGAAGATTAAACGACCGAAGTAACCGTGAGCTGCAACGATGTTGTAAGTTTCTTCTT 718 Query 68150 CTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGAACCAGTG 68209 |||||||||| |||||||| ||||| || || ||||||| |||||||||| | | Sbjct 717 CTTGACCGAATTTGTAACCGTAGTTAGTTGATTCGCTTTCAGTTGTTTCACGAATTAAAG 658 Query 68210 AAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATACGCCAGCAA 68269 ||||||| || | ||||| ||||| || ||| | ||| ||||||||||| ||||||| Sbjct 657 AAGAAGTTACTAATGAACCGTGCATAGCTGAGAATAAAGAACCACCAAATACACCAGCAA 598 Query 68270 CGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACACCAGCATGT 68329 | || ||| ||||| |||||||| | ||||||||||| |||||||| || | |||| Sbjct 597 CACCAGCCATGTGGAATGGGTGCATTAAAATGTTGTGCTCAGCTTGGAATACTAACATGA 538 Query 68330 AGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTGACCGAAAG 68389 ||||||||||||||||||| || | |||||| | |||||||| ||||||||||| | | Sbjct 537 AGTTGAAAGTACCAGAAATACCTAAAGGCATACCATCAGAGAATGAACCTTGACCAATTG 478 Query 68390 GATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACACAGATCC 68449 | || || | ||| ||||| || |||||||| || || |||||| | || || |||||| Sbjct 477 GGTATACTAAGAATACTGCAGAAGCTGCTGCTACTGGAGCAGAGAAAGCTACGAAGATCC 418 Query 68450 AAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTATGCAAAGATA- 68508 ||||||||||||| | ||| || || | |||||||||||| |||||||| | | | || Sbjct 417 AAGGACGCATACCTAAACGGTAAGATAATTCCCATTCACGACCCATGTAAG--ATGCTAC 360 Query 68509 -CCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAACCACTCATC 68567 || | | ||||||| | | | | |||| |||||||||| ||||| ||||||||||| Sbjct 359 TCCTAATAAGAAGTGACAAACGATTAATTGGTAAGGACCACCGTTGTATAACCACTCATC 300 Query 68568 AAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAACTAGGAAC 68627 | | |||||||||||||| || || ||||| | ||| || || || |||||||| | Sbjct 299 GATTGAAGCTGCTTCCCAAATTGGGTAGAAGTGCATACCGATAGCGTTAGAACTAGGGAT 240 Query 68628 AACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGTTCACGAAT 68687 ||| |||||||| |||||||||||||| || | | |||||| || || || ||||| || Sbjct 239 AACTGCACCAGAGATGATGTTGTTACCGTATAATAATGAACCTGCTACTGGCTCACGGAT 180 Query 68688 ACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAAACAGATGGTTGCTGC 68747 ||||||||| || || || ||||| |||||||| |||| |||| |||| ||||||| Sbjct 179 ACCATCGATATCAACTGGAGGAGCTGCGATGAATGCGATGATGTAACAAGAAGTTGCTGT 120 Query 68748 AAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGTTCTCTGTGGA 68807 | | ||||||| ||| | || |||||||| | ||| | ||||| || || Sbjct 119 TAATAATGTAGGGAACATTAAACAACCAAACCAACCGATGTATAAACGGTTTTCAGTACT 60 Query 68808 AGTCACCCATTCGCAGAA 68825 ||| | ||| | ||||| Sbjct 59 AGTAATCCAACCACAGAA 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571989786455520