Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_021347.1 Length=142563 Score E Sequences producing significant alignments: (Bits) Value seq2001 84.2 2e-11 >seq2001 Length=3286380 Score = 84.2 bits (92), Expect = 2e-11 Identities = 196/293 (67%), Gaps = 2/293 (1%) Strand=Plus/Plus Query 105088 GCATGCTCGTCGGTCCCGGCCGTGGTTCGGCCGGTGGCTCGCTCGTCTCGTACCTGATGG 105147 |||| | |||||| || || || || ||||| | || || ||| | ||| | || Sbjct 2540880 GCATTCCCGTCGGGCCGGGACGCGGATCGGCGGCGGGAAGCCTGGTCGCCTACGCGCTGC 2540939 Query 105148 ACATCACCGAGCTCGACCCGATCAAGTACGACCTGATGTTCGAGCGGTTCATCTCGCCGG 105207 |||||| || || || ||| || ||| |||| | |||||||||||| | |||| Sbjct 2540940 GCATCACGGATCTGGATCCGCTCGTCTACAGCCTGCTCTTCGAGCGGTTCCTGAATCCGG 2540999 Query 105208 AGCGGAAGAACTTCCCCGACATCGATCTCGACTTCCCGCA-GAAGCGTCGCGGCGAGGTC 105266 | || | | ||||||||||||| | ||||| | ||| | | || |||||||||||| Sbjct 2541000 AACGTGTGTCCCTCCCCGACATCGACATGGACTT-CTGCATGGATCGCCGCGGCGAGGTC 2541058 Query 105267 GTCGACTACATCGCCGACCGCTACGGCCACGACTGCGTCTGCTCGATCGGCACCCGGGCC 105326 || |||| ||| ||| |||||| | ||| |||| | |||| || | Sbjct 2541059 ATCAACTATGTCGTGGACAAGTACGGCAAAGACCACGTCGCCCAGATCATTACGTTCGGA 2541118 Query 105327 AAGCTCGGCCCGAAGAGCGCGATCCGCGACATCGCCCGCGCGCTGCACATCCC 105379 | |||||| | || ||| |||||||| ||| |||| ||| | ||||| Sbjct 2541119 ACGCTCGGGGCAAAAGCCGCCATCCGCGATGTCGGTCGCGTGCTCGAAATCCC 2541171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 456022086486880