Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq4979 93.3 1e-14 >seq4979 Length=1283317 Score = 93.3 bits (102), Expect = 1e-14 Identities = 173/254 (68%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 33184 AACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCGGAAGTTAAATATATGCCTTCT 33243 || |||| ||| || | |||| ||| || | || |||||||| | ||||| | | | Sbjct 318249 AATAAAGCAATTATCGTTGGCAATCTGGGCAAGGATCCGGAAGTCAGATATACGGCCAGT 318308 Query 33244 GGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATAAAGCAACA 33303 |||| || | ||||| | || |||| || || | ||||| || || | || Sbjct 318309 GGCGAGGCGATTTGCAACATTACTGTGGCGACCAGCGAAAACTGGAAGGACAAGACGACC 318368 Query 33304 GGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGCTGGCAGAG 33363 || || |||||||| ||||| || ||||||||| | | | |||||||||||||| || Sbjct 318369 GGAGAGAAGAAAGAACAGACCGAGTGGCATCGCATTTCTTTTTTCGGAAAGCTGGCTGAA 318428 Query 33364 GTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAAATTACGTACT 33423 || || ||| | || || || || || ||| | ||||| || || | | ||||| Sbjct 318429 GTTGCAGGCCAGTATCTTAAAAAGGGATCGCAGATCTATGTCGAGGGCAGTATCCGTACC 318488 Query 33424 CGCAAATGGACAGA 33437 || || ||||| || Sbjct 318489 CGGAAGTGGACCGA 318502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152028485212848