Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_021559.1 Length=179063 Score E Sequences producing significant alignments: (Bits) Value seq6036 722 0.0 >seq6036 Length=8020 Score = 722 bits (800), Expect = 0.0 Identities = 792/1043 (76%), Gaps = 14/1043 (1%) Strand=Plus/Plus Query 72218 TTTCAGGATGGGACGAGTTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTG 72277 ||||| |||||| || |||| ||| | || ||||| || || | ||| | | Sbjct 25 TTTCATTATGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCG 84 Query 72278 GTTGGTTTGGTGTCTTAATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAG 72337 ||||||||||| |||||| |||| | |||| || || |||||| ||| | | Sbjct 85 GTTGGTTTGGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCG 144 Query 72338 CATTCATCGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTT 72397 |||||||||| ||||||||||| |||||||| || ||| | || ||||| || ||||| | Sbjct 145 CATTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCAT 204 Query 72398 TCTTATATGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGAT 72457 | ||||| ||||||||||||||||||||||| || | || ||| ||||| || || Sbjct 205 TATTATACGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTA 264 Query 72458 TACACTTCTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTC 72517 | |||||||| || || ||||||||||| | || || |||||||| || ||||| |||| Sbjct 265 TGCACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTC 324 Query 72518 CTTACCAGTTAGTTATTTTCCACTTCCTTATT-GGAATCTCTGCCTACATGGGTAGACAG 72576 ||||||| ||| | ||| ||||| |||||| ||| | | | ||||||||| | | Sbjct 325 CTTACCAATTAATCGTTTGTCACTT-CTTATTAGGAGTAGCATCTTACATGGGTCGTGAA 383 Query 72577 TGGGAACTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCT 72636 |||||| |||| ||| | |||| ||| | |||||||| | ||||| | ||| || || Sbjct 384 TGGGAATTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCA 443 Query 72637 GTATCTGCAGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGAT 72696 ||| | ||||| | |||||||||| | || || ||| | ||||| ||||||||||||||| Sbjct 444 GTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGAT 503 Query 72697 GGTATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACAC 72756 |||||||| ||||||| || ||||| |||||||||||||| || |||||||| || ||| Sbjct 504 GGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCAC 563 Query 72757 AACATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTC 72816 ||||| |||||||||| ||||| ||||| ||||| || ||| | || |||||| | | Sbjct 564 AACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTA 623 Query 72817 TTCAGTGCAATGCACGGTTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAAC 72876 ||| || |||||||||||| | || ||||| ||| |||| | || ||||| ||| Sbjct 624 TTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAAC--TGAAA 681 Query 72877 GAGAGTCAA--AACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTG 72934 | || |||| |||||||| || || ||||| |||||||||||||| || ||||| |||| Sbjct 682 GCGAATCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTG 741 Query 72935 CTGCTCATGGATACTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTT 72994 | ||||| || ||||||||| | ||||||||||| || || |||||||||||||||||| Sbjct 742 CAGCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTG 801 Query 72995 CATTACACTTCTTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTA 73054 | |||||||||||| | ||| ||| || || | || | |||||||| | ||||||| Sbjct 802 CTTTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTA 861 Query 73055 TCTGTACAATGGCATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAA 73114 | |||| ||||| |||||| | ||||| ||||||||||||||||||||||||||| || Sbjct 862 TTAGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCAC 921 Query 73115 ACGGAAAGATTGT-ACCAACA--TGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGG 73171 | || ||| | ||||| |||| ||| | ||||| | || | | || |||| Sbjct 922 AAGG---TCGTGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGG 978 Query 73172 AAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCATCTGCTG-AGTCT 73230 |||| ||||| ||| | || || |||||||||||| |||| |||| || | || ||| | Sbjct 979 AAGTAATGCACGAACGTAACGCGCACAACTTCCCATTAGATTTAGCTTCAGGTGAAGTAT 1038 Query 73231 ACAACAGTTGCATTAACTGCACC 73253 | ||||||| ||||| || || Sbjct 1039 -TACCAGTTGCTTTAACAGCTCC 1060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572808893926880