Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq3628 152 2e-32 >seq3628 Length=2627 Score = 152 bits (168), Expect = 2e-32 Identities = 251/362 (69%), Gaps = 0/362 (0%) Strand=Plus/Plus Query 31442 TTGCCACCGCCCTGACTGTCGAGCATGGTCAGCGTCGCATTGAAGCCGTTCAACACCACT 31501 || |||||||| ||||||||||||||||| ||| | ||| | | ||||| Sbjct 261 TTACCACCGCCTGCGCTGTCGAGCATGGTCAGAACGGCACCGGGGCCTTGAAGGACCACC 320 Query 31502 TCGGTTGTGTAGCGATCACCACCGTCGGAGTGCTGCCACTTGCGGGTTTGCAGCTTGCCC 31561 ||||| ||||||| || || | || ||||||||||||||| | |||| || Sbjct 321 TCGGTGCTGTAGCGGTCCTGTCCCTGCTGGTCCTGCCACTTGCGGGTGCGGAGCTGACCT 380 Query 31562 TCGATGTAAACCTTCGATCCCTTTTTCAGGTATTGCTCGCAAACCTTGACGAGACCTTCG 31621 |||||||| ||||| ||||| |||| | |||| |||| ||| ||||||||| Sbjct 381 TCGATGTAGACCTTGCTGCCCTTGCGCAGGAAGCGCTCCGCAACCCCGACCAGACCTTCG 440 Query 31622 GTGAAGACGACGACGCTATGCCACTCGGTGCGCTCCTTGCGGTCGCCGCTGTCGCGGTCG 31681 | |||| | || | ||||||||||||||||||| ||||| ||| | | ||| Sbjct 441 GAAAAGATCGCAACCGTGTGCCACTCGGTGCGCTCCTGCCGGTCACCGGTATTCTTGTCT 500 Query 31682 CGCCAGCTTTCGGAAGTCGCAAGGCGAAGGCTGGCGATGCTACCCCCGGCTTGTGTCTTT 31741 ||||||||| || || || | ||| | | || || | || ||| || | Sbjct 501 TTCCAGCTTTCTGACGTGGCGATGCGGATGTTGCAGACCCGGCCACCGTTCTGAAACGAG 560 Query 31742 CGGATTTCCGGATCGGCGCCGAGATGGCCGATAAGAATGACTTTGTTGACGCTACCGGCC 31801 |||| ||||||||||| || |||| ||||| || ||||| ||||||||||| || ||| Sbjct 561 CGGACCTCCGGATCGGCCCCCAGATTGCCGACCAGGATGACCTTGTTGACGCTGCCTGCC 620 Query 31802 AT 31803 || Sbjct 621 AT 622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169786579520448