Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3336 138 1e-26 seq2851 125 9e-23 seq1224 102 1e-15 seq1676 96.9 4e-14 seq2057 91.5 2e-12 seq1813 89.7 6e-12 seq2001 87.8 2e-11 >seq3336 Length=256698 Score = 138 bits (152), Expect = 1e-26 Identities = 133/171 (78%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 1254378 GCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCG 1254437 |||||||||||||| || | ||| ||| ||||||||| |||| |||||||||| | Sbjct 71556 GCGGTCTGGATCTCCCGGCTCGTGATGGTGGAGCGCTTGTTGTAGTGGGCCAGACGGCTG 71497 Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 || |||| | |||| || |||| ||||||||||| || |||||||| ||| | | Sbjct 71496 GCTTCGGCGGCGATACGCTCGAAGATGTCGTTGACGAATCTGTTCATGATGCTCATGGCC 71437 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||| |||||| || ||||||||| |||||||| ||||||||||||||| Sbjct 71436 TTGCTGGAGACTCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGTAGATG 71386 >seq2851 Length=3232 Score = 125 bits (138), Expect = 9e-23 Identities = 274/399 (69%), Gaps = 15/399 (4%) Strand=Plus/Plus Query 1726648 GGCCGCGCGCCCGTCGCCGTCCAGCCATAGAAAGGTATGCGGCTGGGCGGCGGCGC--GC 1726705 |||| ||||||||| || || | | | ||| ||| ||| | | ||| ||| | Sbjct 628 GGCCACGCGCCCGTTCTTGTGCACCGACAAGAAGTGATGTGGCCG--CTGCGCCGCCTGA 685 Query 1726706 ACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGC 1726765 | |||||||| || || || | || ||||||||||||||||||||||||| | Sbjct 686 ATGGCGTCGATGGCGATCTTCAAATTGCCATCGGTGCCGTTCTTGAAGCCGATGGGCGCT 745 Query 1726766 GGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCG 1726825 | || | || |||| || |||||||||||||| ||||| ||||||||||| | |||| Sbjct 746 GAAAGCCCGGAGGCCAGTTCACGGTGCACCTGGCTTTCGGTGGTGCGCGCGCCGATGGCG 805 Query 1726826 CCCCACGCCACCAGGTCTGCCAAATA-AGGGGCCACCAGAGGACTGAGAAACTCGACGGC 1726884 ||||| | | || || || | || | || | | | | || || ||| ||| Sbjct 806 CCCCAGGAAATGAGATCGGCGATGTACTGCGGGCTGATGGTGTC-CAGGAATTCGCTGGC 864 Query 1726885 CACGGGCTGATCGACGGCGACGACGAGATC--GC-GCAACAGGCGGCGCGACGCCGTCAG 1726941 | | ||| | | |||| | || || || ||||| ||| |||||| || ||| Sbjct 865 CGCCGGCACGCCCA-GGCG--GTTGATCTCCAGCAGCAACTGGC-GCGCGATGC--GCAG 918 Query 1726942 GCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCC 1727001 ||| ||| | | |||| | | |||| |||| ||||||| || |||||||||||| || Sbjct 919 GCCTTCGTCGATGCGGTAACTCTCGTCCAGGTAGGGGTCGTTGATCAGGCCCTTCCAGCC 978 Query 1727002 GACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGAC 1727040 || || ||||| |||||||||| ||| | ||||| || Sbjct 979 CACCGTGGTGCGGGGCTTTTCGAAATACACACGCATCAC 1017 >seq1224 Length=1352561 Score = 102 bits (112), Expect = 1e-15 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||| | ||||||||| | |||| || | |||||| |||||||||| Sbjct 928488 GCTGCCAACTACTTGGACATCAAGGGTTTGCTGGACGTGACTTGCAAGACTGTGGCCAAT 928429 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||| | ||||| || ||||| ||||| || ||||||||| Sbjct 928428 ATGATCAAGGGCAAGACCCCCGAAGAAATCCGAAAGACTTTCAACATCAAG 928378 >seq1676 Length=7853 Score = 96.9 bits (106), Expect = 4e-14 Identities = 122/165 (74%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 1726679 AAGGTATGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCG 1726738 |||| |||||| || ||||| | | | | |||| ||| | ||| | || ||| Sbjct 7506 AAGGCATGCGGGGCCGCTGCGGCATGGATGCCATCGACCGCCACCTTCACCCCGCCATCG 7565 Query 1726739 GTGCCGTTCTTGAAGCCGAT-GGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTG 1726797 ||||||||||||||||| | || |||| ||| |||| |||| | ||||| ||| Sbjct 7566 GTGCCGTTCTTGAAGCCCACCGGGCAGCT-CAGGCCCGAGGCCAGTTGCCGGTGGGTCTG 7624 Query 1726798 GCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTC 1726842 ||||||||| ||||||||||| | |||||||| ||||||||||| Sbjct 7625 GCTCTCGGTGGTGCGCGCGCCGATCGCGCCCCAGGCCACCAGGTC 7669 >seq2057 Length=842785 Score = 91.5 bits (100), Expect = 2e-12 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || || || ||||||| ||| | || || ||||| || || | || ||| Sbjct 609608 CTGGTCCACATAACGAGCCGTGTTGTTGTACACACGTAGCATAGGTACCAATCCATTGCT 609667 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||| |||||||| | ||| | || || || || | ||| || | || Sbjct 609668 GACACCGTTAGTGCCCGCAATGTAAGATCCAGCAGCTCGGATGCAGTGTACGTTGACACC 609727 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||||| || || ||||||||||| || || ||||||||||| || || ||||| ||||| Sbjct 609728 AATGCCACCAGCAGACTTGGAGATTAGTGCACACTGTTTGAGGGTATCATAGATTCCCTC 609787 Query 1630245 GATCGAGTCGGCCTTCAT 1630262 || ||| ||||||| Sbjct 609788 AATGCTGTCATCCTTCAT 609805 >seq1813 Length=735787 Score = 89.7 bits (98), Expect = 6e-12 Identities = 153/221 (69%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 868789 CTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACAT 868848 |||| | || |||||| | | ||||| ||||| || || ||||||||||| || ||| Sbjct 441075 CTTTGCACAGCCGAGCTCCACTAGCAGCCGGTCAGCCACGAACTCGATGTATTGCTTCAT 441016 Query 868849 GAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTC 868908 |||| | ||||||||||||| | || || || | | ||| | | ||||||| ||| Sbjct 441015 GAGGTCTCCGTTCATGCCGATCATGGCAACAGGGATGGCCTCTGTTAGGAACTCTTGCTC 440956 Query 868909 GATCTCGACGGCCTCGACGATGATCTGCCTGGGCACGTCGGCCGAGGGCTTGTTGACGAG 868968 ||| | ||||| || ||| || || | | || | | |||||| | || || Sbjct 440955 AATCACAACGGCGTCACGGATTATGAGCACCACCTCCTCTTCAGTGGGCTTCTGCACCAG 440896 Query 868969 CATCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA-ACCCT 869008 | || | | |||||| |||||||||||||| | ||||| Sbjct 440895 ATGCTTGAACATCAGGCACGCAAAGTCGCAGTGGAGACCCT 440855 >seq2001 Length=3286380 Score = 87.8 bits (96), Expect = 2e-11 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 92600 CTCGGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCG-GAAAACATGTCGA 92658 ||| |||||||| ||||| |||||||| || |||| | || | ||| | |||| Sbjct 1517252 CTCCGCGATCTGCACGGTGAGCCGTTCCTGCACTTG-AAGCCGACGCGCGAACGTATCGA 1517194 Query 92659 CGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCACGTGGG 92718 ||||||| || |||||||| ||||||| || | | ||||| || || || || Sbjct 1517193 CGATGCGGGGAATCTTGCTAAGGCCGACGACTTTCTTATTCGGCAGATAACCGACATGCA 1517134 Query 92719 CCTTGCCCATA-AAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGC 92777 ||||||| ||| || ||||||| ||| ||||||||||| | | || |||| ||| Sbjct 1517133 CCTTGCC-ATAGAACGGCAGCAAATGATGCTCGCACATACTGTAGAAATCGATGTCTTTT 1517075 Query 92778 ACGATCACCATCTC 92791 ||||| ||||| || Sbjct 1517074 ACGATGACCATTTC 1517061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106397663524412