Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= NC_022066.1
Length=108297
Score E
Sequences producing significant alignments: (Bits) Value
seq2001 105 5e-18
seq6557 104 2e-17
seq664 98.7 7e-16
>seq2001
Length=3286380
Score = 105 bits (116), Expect = 5e-18
Identities = 129/174 (74%), Gaps = 3/174 (2%)
Strand=Plus/Plus
Query 95178 TTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAAT 95237
|||||| | ||| |||| |||||||| || ||||| ||||||||||| || ||||| ||
Sbjct 680499 TTTGATCAAGCCGGTGAGCACATCCACTGACGGCCGTTGCGTCGCCAGCACAAGATGGAT 680558
Query 95238 ACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTA 95297
||||| || | ||| |||| || | || | || ||| ||||||| |||||| |
Sbjct 680559 ACCGGACGCCCTGGCCATCTGTGCCAGCCGAGCGATCTTGTCCTCGACATCTTTC--GGC 680616
Query 95298 GCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGGAG 95351
||| ||||||| | || || || || |||| || |||||||| ||||| ||
Sbjct 680617 GCC-ACCATCATTAAATCAGCCAGCTCATCGATCATCACCACGATATAGGGCAG 680669
Score = 87.8 bits (96), Expect = 1e-12
Identities = 133/188 (71%), Gaps = 6/188 (3%)
Strand=Plus/Plus
Query 95455 TCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATC 95514
||||||| ||| ||| ||| | ||||||||| |||| || | | | |||| ||||
Sbjct 680941 TCGGTGATCACAGGCCGCAGCAAGTGGGGGATCCCGTCATACGACGAAAACTCCAGCATC 681000
Query 95515 TTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACC 95574
||||| ||||||| || ||||| ||| || || | || | || ||| | |
Sbjct 681001 TTCGGATCGATCAGGAGCAGCTTAACCTCATTCGGCCTTGCGGAAAACAGAATGCTCAAC 681060
Query 95575 AGCATCGAGTTGAT---GAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGG 95631
| ||||| |||| || ||| |||||| | |||||||||||| ||||||||||||
Sbjct 681061 AACATCGTATTGAGCCCGACGCT---CTTGCCGGCTCCGGTGGCGCCGGCCACCAGCAGG 681117
Query 95632 TGGGGCAT 95639
|| |||||
Sbjct 681118 TGCGGCAT 681125
>seq6557
Length=877522
Score = 104 bits (114), Expect = 2e-17
Identities = 134/183 (73%), Gaps = 3/183 (2%)
Strand=Plus/Minus
Query 95166 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95225
||| | ||||| ||||| ||||| |||| || || || || |||||||| || ||
Sbjct 104998 CGGGATGTTGGCCTTGATCAGGCCGGTGATCACGTCGACACTCGGACGCTGCGTGGCGAG 104939
Query 95226 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 95285
|| ||||| ||||| | || ||||| ||||| |||| |||| | || | |||||||
Sbjct 104938 CACAAGATGGATACCCGAAGCCCGCGCTTTCTGCGCGAGGCGGGCGATCTGTTCCTCGAC 104879
Query 95286 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTA 95345
|||| ||| | | ||||||| ||||| || |||||||||| | || ||||||||
Sbjct 104878 --CTTT-TTGCCGACAACCATCATCAGGTCGGCCAGTTCGTCGATGATGACGACGATGTA 104822
Query 95346 GGG 95348
|||
Sbjct 104821 GGG 104819
Score = 100 bits (110), Expect = 2e-16
Identities = 172/246 (70%), Gaps = 8/246 (3%)
Strand=Plus/Minus
Query 95407 TCCATCTCCACGGTGAGCCACC---GCAGCGTCTTAACCGCCT-CGTCGGGCTCGGTGAC 95462
|||||||| ||||| |||| |||||| ||| |||||| | || | ||||||||
Sbjct 104673 TCCATCTC---GGTGACGCACCAGTGCAGCGCGTTAGCCGCCTGCTTCATG-TCGGTGAC 104618
Query 95463 CACCGGCTGCAAAAGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTC 95522
|||||| || ||||| ||||| || | ||| | || || | |||||| |||||
Sbjct 104617 GACCGGCGCCAGCAGGTGCGGGATGCCTTCGTAGATCGAAAGCTCAAGCATCTTGGGGTC 104558
Query 95523 GATCATGATGAGCTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGA 95582
|| ||||| || ||| |||| || | ||| ||||||||| || | | |||||
Sbjct 104557 GACCATGAGCAGACGCACCTGATCCGGCTCGGCCTTGTAGAGCATCGACAAGATCATCGC 104498
Query 95583 GTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTT 95642
||||| | ||||||||||| ||||| | || || |||||||| || || | |
Sbjct 104497 GTTGACACCGACCGACTTGCCCGAACCGGTCGTTCCGGCGACCAGCAGATGCGGTGTCCT 104438
Query 95643 GGCCAG 95648
||||||
Sbjct 104437 GGCCAG 104432
>seq664
Length=24935
Score = 98.7 bits (108), Expect = 7e-16
Identities = 127/173 (73%), Gaps = 3/173 (2%)
Strand=Plus/Plus
Query 95172 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95231
||||| |||||||| || |||| ||||||||| ||||||||||| ||||| | ||
Sbjct 13800 GTTGGCCTTGATAAGCCCCGTGATGACATCCACGCTCGGCCGCTGCGTGGCCAGAATCAG 13859
Query 95232 ATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTT 95291
|| || ||| || ||||||||||| || | ||| |||| | |||| || ||
Sbjct 13860 GTGGATGCCGCAGGCCCGCGCCTTCTGCGCCAGCCGGGCAATCAGCTCTTCGA--TC-TT 13916
Query 95292 CTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGT 95344
|||| | ||||||| ||||| || ||||| |||| ||| ||||||||||
Sbjct 13917 CTTGCCCACCACCATCATCAGGTCGGCCAGTTCATCGATCACCACCACGATGT 13969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346387449447768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |