Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_023689.1 Length=76260 Score E Sequences producing significant alignments: (Bits) Value seq4979 251 3e-62 seq2001 165 4e-36 seq2100 96.9 2e-15 >seq4979 Length=1283317 Score = 251 bits (278), Expect = 3e-62 Identities = 536/800 (67%), Gaps = 3/800 (0%) Strand=Plus/Minus Query 66208 GCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCT 66267 || |||||| |||| || ||| | |||||||| || |||||||| || || ||||| Sbjct 188353 GCGCTGGGCGTCGGTGGCCTGCCGCGTGGCCGGGTTGTCGAAATCTATGGTCCGGAATCG 188294 Query 66268 TCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAAC 66327 || || ||| | || || || || || | || ||| | ||||||| ||| || Sbjct 188293 TCCGGCAAGACCACGCTCTGCCTGCAGGTCGTCGCCGAAATGCAGAAGCTCGGCGGGGTT 188234 Query 66328 GCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTG 66387 || |||| || || || || || | || || || | || ||| || ||||| || Sbjct 188233 GCTGCCTTTATTGATGCCGAACATGCGCTCGATCCGCAATATGCCCAGAAACTCGGCGTC 188174 Query 66388 GACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTT 66447 | ||| | |||| || | || ||||| || ||||| ||||| || || |||| Sbjct 188173 AATGTCGGCGACCTGCTGATCTCGCAACCGGATACCGGCGAACAGGCGCTCGAAATCGCC 188114 Query 66448 GACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTG 66507 ||| | || || ||| || | | |||| | ||| ||||||| ||||| || || Sbjct 188113 GACATGCTGGTGCGGTCCGGGTCGGTCGACATCATTGTCATTGACTCCGTGGCCGCGCTC 188054 Query 66508 GTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGC 66567 ||||| ||||| |||| ||||| || || ||| || || ||||| || ||| Sbjct 188053 ACCCCGCGTGCCGAAATCGAGGGCGAGATGGGCGACCAGATGGTTGGGCTGCATGCCCGC 187994 Query 66568 CTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACG 66627 || ||| ||||| |||||||||| |||| || |||| | ||||| |||||| Sbjct 187993 CTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCAACATCAAGAAGACCAATACGCTGGTT 187934 Query 66628 CTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACC 66687 ||| |||||||| | ||| ||||||||| | || | |||| || || ||| Sbjct 187933 GTCTTCATCAACCAGATCCGCATGAAGATCGGTGTCATG---TTCGGCTCGCCGGAAACC 187877 Query 66688 ACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATC 66747 ||||| || ||||| || | | ||| ||||| || || ||| | || | || || ||| Sbjct 187876 ACCACCGGTGGCAATGCGCTCAAGTTTTACGCTTCGGTGCGCCTCGACATTCGCCGTATC 187817 Query 66748 GCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAG 66807 | | | ||| | ||||| || | | |||||| | ||| ||| |||||||||||| Sbjct 187816 GGCGCGATCAAGAAGGGCGACGAAGTTATCGGCAGCGAAACCAAGGTCAAGGTCGTCAAG 187757 Query 66808 AACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATC 66867 |||||| | || || || |||| | ||| ||| | || | ||||| ||||| ||| Sbjct 187756 AACAAGGTCGCGCCCCCCTTCCGCGAAGCCATCTTCGACATCCTCTACGGTGAGGGAATC 187697 Query 66868 TCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGC 66927 || || ||| |||| || |||| ||| || |||| ||||| | || || || Sbjct 187696 TCCCGACAGGGCGAAGTCGTCGAAATGGGTGTCGCGCACAAGCTGGTCGACAAATCAGGT 187637 Query 66928 GCCTGGTTCAAGTACGGGGACAAGAACGTCGCTCAGGGCAAGCCCAAGGCCGTCCAGTGG 66987 ||||||| | ||| || | |||| | | ||||||||| ||| ||| | ||| Sbjct 187636 GCCTGGTACGCCTACAAGGGCGAGAAAATTGGCCAGGGCAAGGACAATGCCCGCGAGTTT 187577 Query 66988 CTCAAGGCCAACCCGGACAT 67007 |||||||| |||| || || Sbjct 187576 CTCAAGGCACACCCAGAGAT 187557 >seq2001 Length=3286380 Score = 165 bits (182), Expect = 4e-36 Identities = 429/647 (66%), Gaps = 9/647 (1%) Strand=Plus/Plus Query 66200 TGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCC 66259 ||||| ||| || || ||||||| | ||| | || |||||| | || || | |||| Sbjct 2301338 TGGACATCGCGCTCGGAGTCGGGGGCTTGCCGCGCGGACGGGTGATTGAGATTTTTGGCC 2301397 Query 66260 CAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCCG 66319 | || || || || ||| | || || ||||| | ||| | | |||||| ||| Sbjct 2301398 CGGAGTCGTCCGGCAAGACGACGATGACGCTCCATTGTATTGCCGAGGTTCAGAAGACCG 2301457 Query 66320 GTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG-TACGCCAAGGCG 66378 | ||| || |||| |||||| || || || ||||||| ||| || ||| | | Sbjct 2301458 GCGGCGTGGCGGCCTTCATCGATGCGGAACATGCCCTGGATT-TGACCTATGCCCAAAAG 2301516 Query 66379 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 66438 || || ||| | || | | | ||| |||||||| || |||||||||||| || Sbjct 2301517 CTGGGAGTGCAGGCAGATGAGTTGCTTGTGTCCCAGCCGGATACCGGCGAGCAGGCCTTG 2301576 Query 66439 GAGATCGTTGACCTCCTCGTCA--AGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTG 66496 || |||| ||| || || ||| |||| | | || | |||| || || || | Sbjct 2301577 GAAATCGCTGAGACGCTGGTTCGCAGTGGAGCGATC-GACC-TGATCGTGGTGGATTCGG 2301634 Query 66497 TGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCC 66556 | || || || ||| || || || |||||||||| || || || ||| | ||| Sbjct 2301635 TCGCCGCGCTCACGCCACGGGCTGAAATCGAAGGCGAAATGGGCGATTCTCATATGGGCT 2301694 Query 66557 TGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCA 66616 |||| ||||| ||||||||||||||| |||| ||||| || | | ||||| | | Sbjct 2301695 TGCAGGCGCGGCTCATGTCGCAGGCCTTGCGTAAGCTGACGGCTGCTATCTCGAAGTCTC 2301754 Query 66617 ACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCC 66676 | ||| | | | |||||||| | ||| |||||| || ||| | |||| Sbjct 2301755 AGACGACATTGATTTTCATCAACCAGATCCGCATGAAGATTGG---GGTGATGTTCGGCA 2301811 Query 66677 CGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATG 66736 ||| ||||| || ||||| || || |||| |||||| |||| || ||| | ||| Sbjct 2301812 ATCCCGAAACCACGACCGGCGGGAATGCGTTGAAGTTCTATTCCTCGGTTCGCCTTGATA 2301871 Query 66737 TCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGA 66796 | || ||||||| | | || || || | || | | || ||||| ||||||| Sbjct 2301872 TTCGCCGCATCGAGTCTGTAAAAGAGGGGCAGGATGTGATGGGGAACCGGGTGCGGGTGA 2301931 Query 66797 AGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTC 66843 |||||||||| |||||| |||| |||||| ||| | || |||||| Sbjct 2301932 AGGTCGTCAAAAACAAGATGGCGCCGCCGTTTCGCCAGGCGGAGTTC 2301978 >seq2100 Length=6174 Score = 96.9 bits (106), Expect = 2e-15 Identities = 184/271 (68%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 66179 TTCCCACCGGCTCTATCGCCCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCC 66238 || ||||||| || | | || ||| ||| ||||| | || || ||| | |||| Sbjct 289 TTTCCACCGGGTCCCTGGGGCTTGACATCGCCCTGGGAGTGGGCGGCCTGCCGCGCGGCC 230 Query 66239 GGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGG 66298 | ||||| |||||||||||||| |||||||| || ||| | || || || || | | Sbjct 229 GCGTGGTCGAAATCTACGGCCCGGAATCTTCGGGCAAGACCACGCTCACGCTGCAGGTGA 170 Query 66299 TGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGG 66358 | ||| | ||| ||| ||| ||| ||||| |||||| || || ||| | || | Sbjct 169 TCGCCGAGATGCAAAAGCTCGGCGGCGTGTGCGCCTTCATCGATGCCGAACACGCGCTCG 110 Query 66359 ACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGG 66418 | | | ||||| | |||||| ||| |||| | |||| | | ||||| | Sbjct 109 ATACGCAATACGCGCAAAAGCTCGGCGTGAACCTGCAAGACCTGCTCATCAGCCAGCCCG 50 Query 66419 ACACTGGCGAGCAGGCCCTGGAGATCGTTGA 66449 |||| ||||||||||| ||||| ||||| || Sbjct 49 ACACCGGCGAGCAGGCACTGGAAATCGTCGA 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243880339414716