Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_024329.1 Length=39425 Score E Sequences producing significant alignments: (Bits) Value seq2516 100 7e-17 >seq2516 Length=8726 Score = 100 bits (110), Expect = 7e-17 Identities = 194/284 (68%), Gaps = 2/284 (1%) Strand=Plus/Minus Query 38659 TGGGCGGTAAGCGCACATTGAAGATCGGTGACTTATTCGGCACAGTTGTTGTTCCATTTA 38718 ||||||| |||||||| |||||||||| ||| | | ||||| || || || || || Sbjct 301 TGGGCGGCAAGCGCACGCTGAAGATCGGCGACCTGATGGGCACCGTGGTGGTGCCCTTCC 242 Query 38719 TGAAGCTTGAGACAGAAGAAGATTATGAAGCAATCGAAGAATTAGCAGGAGAAGTT-ATC 38777 || || | || | ||||| || || || | | ||| | | | ||||| | ||| Sbjct 241 TGCCCCTGAAAACGCAGGAAGACTACGACGCCCTGGTGGAACTGGG-GCAGAAGGTGATC 183 Query 38778 GACTTCTTTGCTGAGAATGCACTAGAGCACGAAAGAACTGGTGAGATGATTGAGCGTATC 38837 |||||||| || ||||| || || ||||| ||| | || || |||||||| || || ||| Sbjct 182 GACTTCTTCGCCGAGAACGCGCTGGAGCATGAACGCACCGGCGAGATGATCGAACGCATC 123 Query 38838 GGTATTGTGAATTTTATGGAAGGTATTGGCTTAGACGTTAATCCTAACATGGTTGATTCA 38897 || | ||||| ||| | ||||| || | | || | | || |||||||| | Sbjct 122 GGCCTGGTGAACTTTCTCGAAGGCATCGAGGTGGAGATCGACCCGAACATGGTCTCCGCG 63 Query 38898 CCACGTTACATGTCATATGTTCGAATGGACAAGTGGGACGAAGA 38941 || || || | ||||| || |||||| |||||||| || Sbjct 62 CCGCGCACCAACCCCTATGTGCGCATGGACGGCTGGGACGACGA 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126024875764584