Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq6036 563 3e-156 >seq6036 Length=8020 Score = 563 bits (624), Expect = 3e-156 Identities = 660/882 (75%), Gaps = 10/882 (1%) Strand=Plus/Plus Query 19600 CATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGAACCCGTATC 19659 ||| || |||||||| || ||||| |||||||| || ||||| ||||| || || ||| | Sbjct 137 CATCATCGCATTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGC 196 Query 19660 CGGTAGCCTTCTT-TATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAGCAGCAATG 19718 ||| | || || || || ||||||||||| || || || || | || || || | Sbjct 197 AGGTT-CATTATTATACGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACG 255 Query 19719 CCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTACA 19778 | ||||| | ||||||||||||||||||||||| |||| | ||||| ||| | |||| Sbjct 256 CTATCGGTATGCACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACA 315 Query 19779 ACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACATGG 19838 |||| || || | |||| | | || | |||||| | | || | ||||||||| Sbjct 316 ACGGTGGTCCTTACCAATTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCTTACATGG 375 Query 19839 GACGAGAGTGGGAACTTAGCT-ATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTAC 19897 | || || |||||| ||| || | || |||| ||| | |||||||| | || || | | Sbjct 376 GTCGTGAATGGGAA-TTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTC 434 Query 19898 TCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCGTCTACCCGTTTGGTCAGGGTAGC 19957 |||||||| || ||||| || ||||| || || | || ||||| ||||||| ||| Sbjct 435 TCTGCTCCAGTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCA 494 Query 19958 TTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAA 20017 ||||| |||| ||||||||| ||||| || ||||| ||||||| |||||| ||||||||| Sbjct 495 TTCTCTGATGGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAA 554 Query 20018 GCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGT 20077 || || || |||||| | |||||||| ||||||||| |||||| ||||||||||| ||| Sbjct 555 GCTGAGCACAACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGT 614 Query 20078 GGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAGACT 20137 || || ||||| || ||||||||||| | || || || || | | ||||| || Sbjct 615 GGTTCTTTATTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACA 674 Query 20138 ACTGAACAGGAAAGTCA--GAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATA 20195 |||||| ||| ||| ||||| |||||||| || || ||||||||||| || || | Sbjct 675 ACTGAAAGCGAA--TCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACA 732 Query 20196 ACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACA 20255 ||||||| || ||||| |||||||| || ||||| ||||||||||||||||| ||||||| Sbjct 733 ACATCGTTGCAGCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACA 792 Query 20256 ATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTG 20315 | ||| || ||||||||||| | ||| ||||| || |||| || ||||| ||| Sbjct 793 ACTCTCGTGCTTTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTG 852 Query 20316 CCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTC 20375 | |||| || ||| |||||||| || | |||||||||||||| ||||| || || Sbjct 853 CTATGGGTATTAGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTG 912 Query 20376 TCGA-CAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTC 20434 | || |||| |||||||| || | ||||||||||| || | || |||||| || | Sbjct 913 TAGATTCACAA-GGTCGTGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTA 971 Query 20435 GGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCA 20476 || | || || ||||| ||||| || || || ||||||||| Sbjct 972 GGTATGGAAGTAATGCACGAACGTAACGCGCACAACTTCCCA 1013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148812830297688