Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq6036 517 3e-142 >seq6036 Length=8020 Score = 517 bits (572), Expect = 3e-142 Identities = 654/894 (73%), Gaps = 4/894 (0%) Strand=Plus/Plus Query 28728 CATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGAACCTGTCGC 28787 ||| || |||||||| || || || |||||||| || ||||| ||||| || || || || Sbjct 137 CATCATCGCATTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGC 196 Query 28788 TGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAGCAGCAATGC 28847 || | | || || ||||||||||| || || || || | || || || || Sbjct 197 AGGTTCATTATTATACGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGC 256 Query 28848 CATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAA 28907 ||||| | ||||||||||||||||||||||| |||| | ||||| ||| | ||||| Sbjct 257 TATCGGTATGCACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAA 316 Query 28908 CGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGG 28967 ||| || || | |||| | | || | |||||| | | || || |||||||||| Sbjct 317 CGGTGGTCCTTACCAATTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCTTACATGGG 376 Query 28968 ACGCGAGTGGGAACTTAGC-TATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACT 29026 || || |||||| ||| | || || |||| ||| | || ||||| | || || | || Sbjct 377 TCGTGAATGGGAA-TTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCT 435 Query 29027 CAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGTCAAGGTTCTT 29086 | ||||| || ||||| || ||||| || ||| | || |||||| | ||||||||||| | Sbjct 436 CTGCTCCAGTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCAT 495 Query 29087 TTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTGGTGTTCCAAG 29146 | || | |||||||| |||||||| || || ||||||| |||| | || ||||||| Sbjct 496 TCTCTGATGGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAG 555 Query 29147 CCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGAGTGTTCGGTG 29206 | || || |||||| | |||||||| ||||||||| || |||||||| || || |||| Sbjct 556 CTGAGCACAACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTG 615 Query 29207 GCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTGCGTGAGACGA 29266 | || |||| || ||||||||||| | || || || || | | ||||| || | Sbjct 616 GTTCTTTATTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAA 675 Query 29267 CTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAGACTTATAACA 29326 ||||| | || ||||| |||||||| || || ||||||||||| ||||| |||| Sbjct 676 CTGAAAGCGAATCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACA 735 Query 29327 TCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATA 29386 |||| || |||||||||||||| || ||||| ||||||||||| ||||| ||||| || Sbjct 736 TCGTTGCAGCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACT 795 Query 29387 GCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCT 29446 ||| || ||||||||||| | ||| ||||| || |||| || ||||| |||| Sbjct 796 CTCGTGCTTTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTA 855 Query 29447 TGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCG 29506 |||| || ||| |||||||| || | |||||||| ||||| ||||| || || | | Sbjct 856 TGGGTATTAGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAG 915 Query 29507 A-CAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGC 29565 | |||| |||||||| || || |||||||||||| | | || || ||| | | || Sbjct 916 ATTCACAA-GGTCGTGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGT 974 Query 29566 TTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGCTACA 29619 | ||||||||||| || ||||| || || ||||||||| | ||| | ||| || Sbjct 975 ATGGAAGTAATGCACGAACGTAACGCGCACAACTTCCCATTAGATTTAGCTTCA 1028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146649862414456