Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3336 116 5e-20 seq2851 100 4e-15 seq1676 98.7 1e-14 seq112 91.5 2e-12 seq1813 89.7 7e-12 >seq3336 Length=256698 Score = 116 bits (128), Expect = 5e-20 Identities = 131/176 (74%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||||| |||||||| |||||| |||| | ||||| |||| || Sbjct 71387 ATCTACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGAGT------CTCCAGCAAGGCC 71440 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| || |||| | |||| ||| | Sbjct 71441 ATGAGCATCATGAACAGATTCGTCAACGACATCTTCGAGCGTATCGCCGCCGAAGCCAGC 71500 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGC 725086 || ||||| | || |||||||||| ||| ||| | || |||||||||||||| Sbjct 71501 CGTCTGGCCCACTACAACAAGCGCTCCACCATCACGAGCCGGGAGATCCAGACCGC 71556 >seq2851 Length=3232 Score = 100 bits (110), Expect = 4e-15 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 165765 TGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCG 165824 ||||||||| |||| |||||||||||||| |||||||||||||| || |||| || | | Sbjct 810 TGGGGCGCCATCGGCGCGCGCACCACCGAAAGCCAGGTGCACCGTGAACTGGCCTCCGGG 751 Query 165825 CTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGTGGCGACGGCCCTCGAT 165884 || | |||||| |||||||| ||| ||||||| |||| || || ||| |||| Sbjct 750 CTTTCAGCGCCCATCGGCTTCAAGAACGGCACCGATGGCAATTTGAAGATCGCCATCGAC 691 Query 165885 GCC 165887 ||| Sbjct 690 GCC 688 >seq1676 Length=7853 Score = 98.7 bits (108), Expect = 1e-14 Identities = 222/324 (69%), Gaps = 11/324 (3%) Strand=Plus/Minus Query 165566 CTATGTCGAAAAGCCGCGCACGACCGTTGGATGGAAGGGCCTGGCCAGTGACCCCGATCT 165625 |||| |||||||||||||||| ||||| || ||||||||| || ||| || |||| Sbjct 7853 CTATTTCGAAAAGCCGCGCACCACCGTGGGCTGGAAGGGCTACATCAATGATCCGCATCT 7794 Query 165626 TGATGGCTCGTGCCGCCTGGCTGATGGCCTTGATACATCGCGCCGCCTGCTGCGTGATCT 165685 || ||| | | | | || || || || |||| || |||||| ||| Sbjct 7793 GGACGGCAGCTTCGCCATCAACGAAGGGCTGGAACGCGCGCGGCGGTTGCTGC-TGAAAA 7735 Query 165686 CGTCGTCGACGTCGACCAACCCGTGGCCGTCGAGTTTCTCAGTCCTCTGGTG-GCCCCCT 165744 || ||| ||| || || |||| | ||||||||| | ||| | | |||| | Sbjct 7734 --TCACCGAAATCGGCCTGCCGGTGGGCACCGAGTTTCTT-GACCT--GCTCAGCCCGCA 7680 Query 165745 ATTTGGCAG--ACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGT 165802 || ||| ||||||| | |||||||| |||| ||||||||||||||||||||| Sbjct 7679 GTTCATCAGCGACCTGGTGGCCTGGGGCGCGATCGGCGCGCGCACCACCGAGAGCCAGAC 7620 Query 165803 GCACCGCGAGATGGCGTCGGCGCTGCCGCTGCCC-ATTGGCTTCAAAAACAGCACCGACG 165861 ||||| | |||| |||| ||| ||||||| | |||||||| ||| ||||||| | Sbjct 7619 CCACCGGCAACTGGCCTCGGGCCTG-AGCTGCCCGGTGGGCTTCAAGAACGGCACCGATG 7561 Query 165862 GCAGCGTGGCGACGGCCCTCGATG 165885 || | ||| | ||| |||||| Sbjct 7560 GCGGGGTGAAGGTGGCGGTCGATG 7537 >seq112 Length=422422 Score = 91.5 bits (100), Expect = 2e-12 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 || |||||| | | ||||| ||| | |||||||||||||||||| |||||||| ||| Sbjct 43332 GCCGACCTGATTGCCTGGGGAGCCATTGGTGCGCGCACCACCGAGTCGCAGGTGCATCGC 43391 Query 165810 GAGATGGCGTCGGCGCTGCCGCTGCCC-ATTGGCTTCAAAAACAGCACCGACGGCAGCGT 165868 || |||| || | || | |||||| |||||||||| ||| | |||||||||| | | Sbjct 43392 GAACTGGCTTCTG-GCCTCTCCTGCCCGGTTGGCTTCAAGAACGGAACCGACGGCAACAT 43450 Query 165869 GGCGACGGCCCTCGATGCCGTGCGCACTGCCGCCCAGCCACACACCTTTCTCTGGGT 165925 | | || |||||||| | ||| | ||| ||| ||| ||| |||| ||| Sbjct 43451 GCGCATCGCGGTCGATGCCATCCGCTCGGCCAATTCGCCGCACCACTTCCTCTCGGT 43507 >seq1813 Length=735787 Score = 89.7 bits (98), Expect = 7e-12 Identities = 153/221 (69%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 1455848 GGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTT 1455907 ||| ||||||| | | ||| | || ||| ||||||||| ||||| | || || Sbjct 438974 GGTTCACTGGGAGACCTTGAAGCAAGAGGAGAAACATTTCATCTCCCACGTGTTGGCGTT 439033 Query 1455908 TTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGG 1455967 || ||| || || |||||||| |||||||||| | | || | | |||| Sbjct 439034 CTT-CGCTGCGTCTGACGGCATCGTCAATGAGAACCTGGTGGAGAGGTTCAGCCAGGAGG 439092 Query 1455968 TCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACT 1456027 | || |||| || || || | || || || |||||||||||||| || ||| |||||| Sbjct 439093 TGCAGGTGCCGGAAGCTCGCTGCTTCTATGGCTTCCAGATCGCCATGGAGAACGTCCACT 439152 Query 1456028 CTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 | |||| ||| || || ||| |||||||| |||||||| Sbjct 439153 CAGAAATGTACAGTCTGCTCATCAACACCTACATCAAGGAC 439193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176939661191832