Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3957 113 5e-20 seq2057 93.3 4e-14 seq1112 91.5 1e-13 >seq3957 Length=668572 Score = 113 bits (124), Expect = 5e-20 Identities = 145/196 (74%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 134524 CCTTT-TGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAA 134581 ||||| |||||||||||||| | ||| | || || || || ||||||||||| || || Sbjct 478877 CCTTTCTGAATGTTGTAGTCTGACAATG-TGCGACCATCCTCAAGCTGTTTGCCAGCGAA 478819 Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 |||| ||||||||||| || || ||||| ||||| ||||| || || || || Sbjct 478818 GATCAGTCGCTGCTGATCAGGTGGAATGCCCTCTTTGTCTTGGATCTTGGCCTTCACATT 478759 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 || | |||||| || | || || || | || ||||| || || ||||| ||||| || Sbjct 478758 ATCGATTGTGTCTGAAGGCTCAACCTCTAAGGTTATGGTCTTCCCTGTTAATGTTTTTAC 478699 Query 134702 GAAAATTTGCATTTTG 134717 ||| || ||||||||| Sbjct 478698 GAAGATCTGCATTTTG 478683 >seq2057 Length=842785 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 8254 GAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGC 8313 ||||| || | || |||||||| |||||||| || |||||| ||| ||| ||| Sbjct 607911 GAAACAGGCACTCCCTACATGCTCTACAAAGATGCATGCAACCGCAAGTCCAACCAACAG 607852 Query 8314 AACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCC 8373 ||| | |||||||| ||||||||||| ||| |||| ||||| |||||||| | || Sbjct 607851 AACCTTGGCACCATCAAGTGCAGCAATCTCTGCACTGAGATTGTGGAGTACAGCTCTCCT 607792 Query 8374 GACGAAGTGGCCGTTTGCAATCTAGCGTC 8402 || || ||||| || || || || || || Sbjct 607791 GATGAGGTGGCAGTGTGTAACCTTGCTTC 607763 >seq1112 Length=3255245 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| |||| | || | ||| || ||||||||||| ||||| |||||||| Sbjct 2622942 CCTCCTCTCAGTCTGAGAACCAAGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAG 2623001 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| |||||||| || ||||| |||||||| || || || Sbjct 2623002 AGTGTGCGGCCATCCTCAAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGGG 2623061 Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629 || ||||| || || || ||||| Sbjct 2623062 ATTCCTTCCTTGTCCTGGATTTT 2623084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505341315250720