Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq6036 764 0.0 >seq6036 Length=8020 Score = 764 bits (846), Expect = 0.0 Identities = 798/1043 (77%), Gaps = 6/1043 (1%) Strand=Plus/Plus Query 159945 TCATCGTGGGAATCTTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGT 160004 |||| |||||| |||||| | ||| | ||| ||| | ||||| | || ||||| Sbjct 27 TCATTATGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGT 86 Query 160005 TGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGTTTCATCGTCGCC 160064 ||||| || | ||| | || || | || ||||||| |||| |||| |||| Sbjct 87 TGGTTTGGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCA 146 Query 160065 TTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTC 160124 ||| |||| ||||| || || || ||||| || |||||||| || || || |||||| | Sbjct 147 TTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTA 206 Query 160125 ATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTT 160184 | || ||||||||||||||||||||||||||| | || ||| ||||| || ||| | Sbjct 207 TTATACGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATG 266 Query 160185 CACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCT 160244 |||||||| || || |||||||| || ||| | ||||||||| | || |||||||||||| Sbjct 267 CACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCT 326 Query 160245 TTCCAACTCGTAGTATTTCACTTCCTTATCGGCATCTATGCATAT---ATGGGACGTGAG 160301 | |||| | | || | ||||||| |||| | | || |||| | ||||| ||||| Sbjct 327 TACCAATTAATCGTTTGTCACTTC-TTATTAGGAG-TA-GCATCTTACATGGGTCGTGAA 383 Query 160302 TGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCA 160361 |||||| | || ||||||||||||||||| || ||||||| ||||| | ||||||||| Sbjct 384 TGGGAATTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCA 443 Query 160362 GTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGAT 160421 || || ||||| ||||| |||||| | ||||| || | ||||||||||| ||||| ||| Sbjct 444 GTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGAT 503 Query 160422 GCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACAC 160481 | ||||||| | ||||| ||||||||||| |||| |||| | ||||||||||| || ||| Sbjct 504 GGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCAC 563 Query 160482 AATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTG 160541 || || | ||||| || ||||||||| || |||||||| ||||| ||||| ||||| Sbjct 564 AACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTA 623 Query 160542 TTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACA 160601 ||||| ||||||||||| | || ||||| || | |||||||||| ||||||| Sbjct 624 TTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGC 683 Query 160602 GAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCA 160661 || ||| ||||||||||| || ||||||||||| ||||| || ||||||||||| ||| Sbjct 684 GAATCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 743 Query 160662 GCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCA 160721 || || ||||||||||||||||| ||||||||||| || |||||||||||||| ||| | Sbjct 744 GCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCT 803 Query 160722 CTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTT 160781 | ||||||||| | || |||||| || | || |||||||| |||||| | ||| || Sbjct 804 TTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATT 863 Query 160782 AGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAA 160841 || || ||||| |||||| | |||||||||||||||||||| || | | ||| ||| Sbjct 864 AGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 923 Query 160842 GGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTT 160901 ||||||||| | ||||| ||||| || | | || ||||||| | | ||||||||||| Sbjct 924 GGTCGTGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTA 983 Query 160902 ATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTCGCTGCTGCTGAGTCAACTCCT 160961 ||||| || |||||||| |||||||||||| | || | ||| | | ||| | || Sbjct 984 ATGCACGAACGTAACGCGCACAACTTCCCATTAGATTTAGCTTCAGGTGAAGTATTACCA 1043 Query 160962 GTTGCTCTCACCGCACCAGTTGT 160984 |||||| | || || |||| ||| Sbjct 1044 GTTGCTTTAACAGCTCCAGCTGT 1066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559440804023200