Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq6036 737 0.0 >seq6036 Length=8020 Score = 737 bits (816), Expect = 0.0 Identities = 787/1036 (76%), Gaps = 4/1036 (0%) Strand=Plus/Plus Query 177840 TGGGAATCATTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 177899 |||||| ||||| | ||| | ||| ||| | ||||| | || |||||||||| Sbjct 33 TGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTT 92 Query 177900 GGCGTACTGATGATTCCAACTCTGTTGGCAGCAACTATCTGTTTCATCGTCGCCTTCGTC 177959 || | ||| | || || | || |||||||| |||| |||| |||| ||| || Sbjct 93 GGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATC 152 Query 177960 GCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTAT 178019 || ||||| || || || ||||| || |||||||| || || || |||||| | | || Sbjct 153 GCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATAC 212 Query 178020 GGCAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTC 178079 || |||||||||||||||||||||||| | || ||| ||||| || ||| | |||||| Sbjct 213 GGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTC 272 Query 178080 TATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAA 178139 || || || |||||||| || ||| | ||||||||| | || ||||||||||||| |||| Sbjct 273 TACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAA 332 Query 178140 CTCGTAGTATTTCACTTCCTCATTGG--TATCTATGCATACATGGGACGTGAGTGGGAAC 178197 | | || | ||||||| | | || || | || | |||||||| ||||| |||||| Sbjct 333 TTAATCGTTTGTCACTTCTTATTAGGAGTAGC-AT-CTTACATGGGTCGTGAATGGGAAT 390 Query 178198 TTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAG 178257 | || ||||||||||||||||| || ||||||| ||||| | ||||||||||||||||| Sbjct 391 TATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAG 450 Query 178258 CAGCATCGGCAGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGC 178317 |||| || ||||||||| | || || || | |||||||||||||| ||||| | |||| Sbjct 451 CAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGC 510 Query 178318 CACTTGGCATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTC 178377 | | || || |||||||| ||||||| |||| | || |||||||| || ||||||||| Sbjct 511 CTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTT 570 Query 178378 TGATGCACCCCTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTG 178437 | |||||||| ||||||||| ||||| || |||||||| |||||||| | ||| | Sbjct 571 TAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAG 630 Query 178438 CAATGCACGGTTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCAC 178497 | ||||||||||| || || || ||||| | |||||||||| ||||||| |||||| Sbjct 631 CTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCAA 690 Query 178498 AGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATG 178557 ||||| ||||| || ||||| ||||||||||| || ||||||||||||||||| || | Sbjct 691 CTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACG 750 Query 178558 GCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACT 178617 | |||||||||||||| ||||||||||| ||||||||||||||||| ||| | | |||| Sbjct 751 GTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACACT 810 Query 178618 TCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCA 178677 ||||| | || |||||| || | || |||||||| || || |||| | || || | Sbjct 811 TCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACTA 870 Query 178678 TGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTG 178737 |||| || ||| | || || |||||||||||||| || | | || |||||| |||| Sbjct 871 TGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTG 930 Query 178738 TCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACG 178797 | ||||||| ||||| || | | |||||||| | | | || |||||||| ||||||| Sbjct 931 TAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCACG 990 Query 178798 AGCGCAACGCGCACAACTTCCCGCTTGATCTTGCAGCAGCTGAGTCCACACCTGTGGCCT 178857 | || ||||||||||||||||| | ||| | || ||| ||| ||| || || | Sbjct 991 AACGTAACGCGCACAACTTCCCATTAGATTTAGCTTCAGGTGAAGTATTACCAGTTGCTT 1050 Query 178858 TAATTGCTCCTTCTGT 178873 ||| ||||| |||| Sbjct 1051 TAACAGCTCCAGCTGT 1066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605941151215680