Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq6036 737 0.0 >seq6036 Length=8020 Score = 737 bits (816), Expect = 0.0 Identities = 760/990 (77%), Gaps = 6/990 (1%) Strand=Plus/Plus Query 158364 TCATCGTGGGAATCTTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGT 158423 |||| |||||| |||||| | ||| | ||| ||| | ||||| | || ||||| Sbjct 27 TCATTATGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGT 86 Query 158424 TGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGTTTCATCGTCGCC 158483 ||||| || | ||| | || || | || ||||||| |||| |||| |||| Sbjct 87 TGGTTTGGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCA 146 Query 158484 TTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTC 158543 ||| |||| ||||| || || || ||||| || |||||||| || || || |||||| | Sbjct 147 TTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTA 206 Query 158544 ATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTT 158603 | || ||||||||||||||||||||||||||| | || ||| ||||| || ||| | Sbjct 207 TTATACGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATG 266 Query 158604 CACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCT 158663 |||||||| || || |||||||| || ||| | ||||||||| | || |||||||||||| Sbjct 267 CACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCT 326 Query 158664 TTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCATAT---ATGGGACGTGAA 158720 | |||| | | || | ||||||| |||| | | || |||| | ||||| |||||| Sbjct 327 TACCAATTAATCGTTTGTCACTTC-TTATTAGGAG-TA-GCATCTTACATGGGTCGTGAA 383 Query 158721 TGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCACCA 158780 |||||| | || ||||| ||||||||||| || ||||||| ||||| | ||||| ||| Sbjct 384 TGGGAATTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCA 443 Query 158781 GTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGAT 158840 || || ||||| ||||| |||||| | || || || | ||||||||||| ||||| ||| Sbjct 444 GTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGAT 503 Query 158841 GCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACAC 158900 | ||||||| | ||||| ||||||||||| |||| |||| | ||||||||||| || ||| Sbjct 504 GGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCAC 563 Query 158901 AACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTT 158960 ||||| | |||||||| ||||| ||| ||||||||||| ||||| ||||| ||| | Sbjct 564 AACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTA 623 Query 158961 TTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAACA 159020 ||||| |||||||| || | || ||||| || | |||||||||| ||||||| Sbjct 624 TTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGC 683 Query 159021 GAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCA 159080 || ||| ||||| |||||||| ||||| |||||||||||||| || || ||||| ||| Sbjct 684 GAATCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCA 743 Query 159081 GCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCC 159140 || || ||||||||||||||||| ||||||||||||||||||||||||||||| ||| | Sbjct 744 GCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCT 803 Query 159141 TTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTG 159200 || ||||||||| | ||| |||||| ||| | || |||||||| || || | || | Sbjct 804 TTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATT 863 Query 159201 TCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAG 159260 || ||||| |||||| | |||||||||||||||||||| || | | ||| || Sbjct 864 AGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA 923 Query 159261 GGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTT 159320 |||||||| | ||||| ||||| ||| | | |||||||| | | | ||||||||||| Sbjct 924 GGTCGTGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTA 983 Query 159321 ATGCATGAGCGTAACGCACACAACTTCCCA 159350 ||||| || |||||||| |||||||||||| Sbjct 984 ATGCACGAACGTAACGCGCACAACTTCCCA 1013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552411198106880