Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq6036 724 0.0 >seq6036 Length=8020 Score = 724 bits (802), Expect = 0.0 Identities = 749/981 (76%), Gaps = 0/981 (0%) Strand=Plus/Plus Query 178852 TGGGAACAGTTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTC 178911 ||||||| ||||| | ||| | || || | || ||||| || | |||||||| Sbjct 33 TGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTT 92 Query 178912 GGTGTGCTGATGATTCCTACGTTGCTTGCTGCAACTATCTGTTTCATCGTTGCTTTCGTA 178971 ||| | ||| | ||||| || | | |||||| |||| |||| | || ||| | Sbjct 93 GGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATC 152 Query 178972 GCAGCACCTCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTAT 179031 ||||| ||||| || ||||| || || |||||||| || || || |||||| | | || Sbjct 153 GCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATAC 212 Query 179032 GGAAACAACATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTC 179091 || |||||||||||||||||||| ||| |||| ||||| ||||| || ||| | |||||| Sbjct 213 GGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTC 272 Query 179092 TACCCCATCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAA 179151 ||||| || ||||||||||| ||| ||||||||||| | || ||||||||||||| |||| Sbjct 273 TACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAA 332 Query 179152 CTGGTAGTCTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTT 179211 | | || | |||||| | | || | | || ||||| ||||| |||||| | Sbjct 333 TTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCTTACATGGGTCGTGAATGGGAATTA 392 Query 179212 TCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCT 179271 ||||||||| ||||||||||||| ||||||| || || | |||||| ||||| || || Sbjct 393 TCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAGCA 452 Query 179272 GCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCT 179331 || |||||||||| | || || || | ||||||||||| |||||||||| ||||||| Sbjct 453 GCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGCCT 512 Query 179332 CTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTT 179391 | ||||| ||||||||||| |||| |||| | ||||||||||| || |||||||| | Sbjct 513 TTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTTTA 572 Query 179392 ATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCT 179451 |||||||| ||||| ||| ||||||||||| ||||| ||||| ||| | ||||| ||| Sbjct 573 ATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAGCT 632 Query 179452 ATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTCGTGAAACAACTGAGACAGAGTCACAG 179511 |||||||| | || ||||| || | |||||||||||||||| | || ||| Sbjct 633 ATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCAACT 692 Query 179512 AACTATGGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGC 179571 ||||| ||||| || ||||| ||||||||||| || || |||||||| ||||| || || Sbjct 693 AACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGGT 752 Query 179572 TACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTC 179631 |||||||||||||| ||||||||||| || || || |||||||| || |||| |||||| Sbjct 753 TACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACACTTC 812 Query 179632 TTCCTTGCTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATG 179691 ||| | ||| ||||| ||| | || |||||||| |||||| | || | || ||| Sbjct 813 TTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACTATG 872 Query 179692 GCGTTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTC 179751 ||||||||| | |||||||||||||||||||| || | | || ||||| ||||| Sbjct 873 GCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTA 932 Query 179752 CTTAACACATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAG 179811 | ||||| ||||| || | | |||||||| | ||| ||||||||||| ||||| || Sbjct 933 ATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCACGAA 992 Query 179812 CGTAACGCACACAACTTCCCA 179832 |||||||| |||||||||||| Sbjct 993 CGTAACGCGCACAACTTCCCA 1013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610260663271680