Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq3574 147 1e-30 >seq3574 Length=6226 Score = 147 bits (162), Expect = 1e-30 Identities = 127/155 (82%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 21948 CCTGAGCTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACAT 22007 |||||||||| | ||||| ||||||||||| ||||| ||||||||||||||||||||||| Sbjct 3111 CCTGAGCTGCCAGCTCTACCAGCGCAGCGCCGACATTTTCCTGGGCGTGCCCTTCAACAT 3170 Query 22008 CGCCAGCTACGCGCTGCTGACGCACCTCATGGCGGCCACGGT-CGGCATGCAGGCCGAGA 22066 ||||||||||||||||||||||||| | |||| || | || || |||||| | Sbjct 3171 CGCCAGCTACGCGCTGCTGACGCACATGCTGGC-GCAGCAGTGCGATTTGCAGGTGGGCG 3229 Query 22067 AGTTCATCTGGTCTGGCGGTGACTGCCACCTGTAC 22101 | ||||||||| | || || ||||||||| | ||| Sbjct 3230 ATTTCATCTGGACAGGTGGCGACTGCCACATCTAC 3264 Score = 136 bits (150), Expect = 2e-27 Identities = 290/424 (68%), Gaps = 12/424 (3%) Strand=Plus/Plus Query 21394 CAGGGCGAGGGCAAGTCTGACCGCACTGGCACAGGCACCAAGTCCGTATTCGGTGCCCAG 21453 || |||| || |||| | |||||||| ||||| ||||| | | || || |||| Sbjct 2677 CAAGGCGTGGCCAAGACAGACCGCACCGGCACCGGCACGCGCAGCCTGTTTGGCCACCAG 2736 Query 21454 ATGGAATTCGATCTGCGTGAGGGCTTCCCCCTGCTC--CA-GAAGAAGAC-CACCCCCTT 21509 ||| ||||||||| || |||||||| || || || ||||||| |||| | Sbjct 2737 ATGCGCTTCGATCTGAACGAAGGCTTCCCGGTGGTCACCACGAAGAAGGTGCACC----T 2792 Query 21510 CACCACGATCTTCACCGAGCTCTCGTGGATGATGCAGGGCCTGACCAATGTGAACTGGCT 21569 | | ||| || || || |||| | ||| ||| |||| | |||||| Sbjct 2793 GAAAAGCATCATCCTGGAACTGCTGTGGTTCCTGCGCGGCGATTCCAACGCCCGCTGGCT 2852 Query 21570 ACAGCAAAAGGGCTGCCACATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCC 21629 ||| | ||| | ||||||| |||||||||| || || ||||||| ||| || || Sbjct 2853 GCAGGATCGCGGCGTGCGCATCTGGAACGAATGGGCCGGGCCCGATGGCGACCTGGGGCC 2912 Query 21630 GATCTATGGTGCCCAGTGGCGCAGCAT-CCAAGGCCCCGATGGAAAGAACATCGACCAGC 21688 | | || || | |||||||||||| || | |||| || || ||||||||||| Sbjct 2913 GGTGTACGGCGTGCAGTGGCGCAGCTGGCCCACGCCC-GACGGCGGCCACATCGACCAGA 2971 Query 21689 TGGCCAAGGCACAAGAGCTGCTGCTGAACGA-CCCGGACAGCCGCCGCATCATCGTGAAT 21747 ||||| ||| ||| ||| | |||| | ||| || || ||||||||||| | Sbjct 2972 TGGCCGAGGTGGTGAAGCAGCT-CAGAACCAACCCCGATTCGCGGCGCATCATCGTCAGC 3030 Query 21748 GCCTGGAACGTGGCCGAGCTCGACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAG 21807 ||||||||||||||||| || || ||||||||||| || |||||||| | |||||| Sbjct 3031 GCCTGGAACGTGGCCGAACTGCACAAGATGGCCCTGGTGCCCTGCCATGCCTTCTTCCAG 3090 Query 21808 TTCT 21811 |||| Sbjct 3091 TTCT 3094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236617139371796