Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12]
9,036 sequences; 475,911,277 total letters
Query= NC_027348.2
Length=73882
Score E
Sequences producing significant alignments: (Bits) Value
seq3574 147 1e-30
>seq3574
Length=6226
Score = 147 bits (162), Expect = 1e-30
Identities = 127/155 (82%), Gaps = 2/155 (1%)
Strand=Plus/Plus
Query 21676 CCTGAGCTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACAT 21735
|||||||||| | ||||| ||||||||||| ||||| |||||||||||||||||||||||
Sbjct 3111 CCTGAGCTGCCAGCTCTACCAGCGCAGCGCCGACATTTTCCTGGGCGTGCCCTTCAACAT 3170
Query 21736 CGCCAGCTACGCGCTGCTGACGCACCTCATGGCGGCCACGGT-CGGCATGCAGGCCGAGA 21794
||||||||||||||||||||||||| | |||| || | || || |||||| |
Sbjct 3171 CGCCAGCTACGCGCTGCTGACGCACATGCTGGC-GCAGCAGTGCGATTTGCAGGTGGGCG 3229
Query 21795 AGTTCATCTGGTCTGGCGGTGACTGCCACCTGTAC 21829
| ||||||||| | || || ||||||||| | |||
Sbjct 3230 ATTTCATCTGGACAGGTGGCGACTGCCACATCTAC 3264
Score = 136 bits (150), Expect = 2e-27
Identities = 290/424 (68%), Gaps = 12/424 (3%)
Strand=Plus/Plus
Query 21122 CAGGGCGAGGGCAAGTCTGACCGCACTGGCACAGGCACCAAGTCCGTATTCGGTGCCCAG 21181
|| |||| || |||| | |||||||| ||||| ||||| | | || || ||||
Sbjct 2677 CAAGGCGTGGCCAAGACAGACCGCACCGGCACCGGCACGCGCAGCCTGTTTGGCCACCAG 2736
Query 21182 ATGGAATTCGATCTGCGTGAGGGCTTCCCCCTGCTC--CA-GAAGAAGAC-CACCCCCTT 21237
||| ||||||||| || |||||||| || || || ||||||| |||| |
Sbjct 2737 ATGCGCTTCGATCTGAACGAAGGCTTCCCGGTGGTCACCACGAAGAAGGTGCACC----T 2792
Query 21238 CACCACGATCTTCACCGAGCTCTCGTGGATGATGCAGGGCCTGACCAATGTGAACTGGCT 21297
| | ||| || || || |||| | ||| ||| |||| | ||||||
Sbjct 2793 GAAAAGCATCATCCTGGAACTGCTGTGGTTCCTGCGCGGCGATTCCAACGCCCGCTGGCT 2852
Query 21298 ACAGCAAAAGGGCTGCCACATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCC 21357
||| | ||| | ||||||| |||||||||| || || ||||||| ||| || ||
Sbjct 2853 GCAGGATCGCGGCGTGCGCATCTGGAACGAATGGGCCGGGCCCGATGGCGACCTGGGGCC 2912
Query 21358 GATCTATGGTGCCCAGTGGCGCAGCAT-CCAAGGCCCCGATGGAAAGAACATCGACCAGC 21416
| | || || | |||||||||||| || | |||| || || |||||||||||
Sbjct 2913 GGTGTACGGCGTGCAGTGGCGCAGCTGGCCCACGCCC-GACGGCGGCCACATCGACCAGA 2971
Query 21417 TGGCCAAGGCACAAGAGCTGCTGCTGAACGA-CCCGGACAGCCGCCGCATCATCGTGAAT 21475
||||| ||| ||| ||| | |||| | ||| || || ||||||||||| |
Sbjct 2972 TGGCCGAGGTGGTGAAGCAGCT-CAGAACCAACCCCGATTCGCGGCGCATCATCGTCAGC 3030
Query 21476 GCCTGGAACGTGGCCGAGCTCGACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAG 21535
||||||||||||||||| || || ||||||||||| || |||||||| | ||||||
Sbjct 3031 GCCTGGAACGTGGCCGAACTGCACAAGATGGCCCTGGTGCCCTGCCATGCCTTCTTCCAG 3090
Query 21536 TTCT 21539
||||
Sbjct 3091 TTCT 3094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 236271577431428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |