Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq3574 96.9 5e-15 >seq3574 Length=6226 Score = 96.9 bits (106), Expect = 5e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 198335 TGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATCGCGTCT 198394 || |||||||| || ||||| || || ||||||| |||||||| ||||||||||| Sbjct 3118 TGCCAGCTCTACCAGCGCAGCGCCGACATTTTCCTGGGCGTGCCCTTCAACATCGCCAGC 3177 Query 198395 TACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGATTTCATT 198454 ||||| | || ||||||| | || |||||| | || | |||||||||||| Sbjct 3178 TACGCGCTGCTGACGCACATGCTGGCGCAGCAGTGCGATTTGCAGGTGGGCGATTTCATC 3237 Query 198455 TGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCTCCAGCTG 198514 ||||| || || ||| || ||||| | ||| | || ||| | ||| |||||| Sbjct 3238 TGGACAGGTGGCGACTGCCACATCTACAACGACCATTTCGAACAGTGCGCGCTGCAGCTG 3297 Query 198515 ACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCG 198555 ||||| ||| | || | ||| |||| ||||||||| Sbjct 3298 ACGCGCACGCCCTACCCCTACCCGGTGCTGAACATCAAGCG 3338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769106719582880