Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq329 111 2e-19 seq2502 107 2e-18 >seq329 Length=129497 Score = 111 bits (122), Expect = 2e-19 Identities = 252/376 (67%), Gaps = 10/376 (3%) Strand=Plus/Plus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 ||||||||||| || || || | | ||| ||| || ||||| ||||| || || Sbjct 85192 CGATCAAAGCGCCCCGGGCGCAACAAGGCGGGATCGAGAATATCCGGACGATTGGTTGCA 85251 Query 9584 GCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTA 9643 |||||||| | || || | | | ||||||||||||||||| || | ||||| Sbjct 85252 GCGATGACGATGATCCCGGCGTGACCTTCAAAACCATCCATCTCAACCAGCATCTGGTTC 85311 Query 9644 ATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTGCTTTCCCA 9701 | || || || || || ||||| ||| | | || |||| ||| || || | Sbjct 85312 AGGGTCTGCTCGCGCTCGTCATTGCCGCCGCC--GAGGCCGGCACCGCGATGACGACCGA 85369 Query 9702 CGGCATCAATCTCATCAATGAAGACGATGCATGG---TTGATTTTCGCGAGCGACTTCAA 9758 | ||||| || || |||||||||| |||||| || || || | | || || | Sbjct 85370 CCGCATCGATTTCGTCAATGAAGATGATGCAAGGCGCGTGCTTCTTG---GCATTCTCGA 85426 Query 9759 AGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 9818 | | || ||||| ||| ||| ||||| ||||| ||||| || ||||||| | | ||| Sbjct 85427 ACATGTCGCGTACGCGCGCGGCACCCACGCCAACGAACATTTCAACAAAGTCGGAGCCGG 85486 Query 9819 AACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTAC 9878 || || ||| || || || | |||||| ||||| || || || || | ||| || | Sbjct 85487 AAATGCTGAAGAACGGCACCTTGGCTTCACCGGCAATCGCCCGCGCCAGCAAAGTTTTGC 85546 Query 9879 CCGTACCTGGCTTACC 9894 |||| || || || || Sbjct 85547 CCGTCCCCGGGTTGCC 85562 >seq2502 Length=269351 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 168455 GCATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATA 168514 || ||||| || ||| |||||||||||||||||||| ||| || || ||||| Sbjct 88711 GCGTCCTTGCCTCCCTGCAGACGCGTACCAAACTGACCGTTGGGCAGCAGGAGGTTGATG 88770 Query 168515 TTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCA 168574 ||||| || || | ||||| | ||||| |||| || ||| | ||| ||| ||||| Sbjct 88771 TTGTTGGAGCCGACGTAGTTCTGCGCCAGGTTGATGATGGTGGACATGAGCGAGGCTTCA 88830 Query 168575 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCA 168634 ||||||||||||||| | ||| || || | | |||| |||||| || || |||||| Sbjct 88831 CCGTGGTGGTACGCAGAGTGCTCGGCCACGGAGCCAGCCAGCTGCGCGACCTTGATCTCA 88890 Query 168635 TCCTTGAGATTCTTGTGGAAGCATGCGTACATAACCT 168671 |||| || | |||||| | | |||| |||| Sbjct 88891 CGCTTGTCGTTACGCTTGAAGCACGTGAACATCACCT 88927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583194920692640