Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1514 100 3e-16 >seq1514 Length=8380 Score = 100 bits (110), Expect = 3e-16 Identities = 205/305 (67%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 |||| || | |||||| | || || ||||| | || || | || || | ||||| | Sbjct 3553 ACGGCATAATACCAATGTTGCGGGTATTCAATGATACCGCTCGCTATGTAGATCAGGGAG 3612 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 | ||||| ||||||||||| || ||||| || | ||||| ||||| || || || | | Sbjct 3613 GTGGCAAGCGCAAGGGCTCATTTGCCATATATTTGGAGCCTTGGCATGCCGATGTTTTTG 3672 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | | | || || ||||| ||| | || || ||||| ||| || || || Sbjct 3673 AGCTTTTGCAATTGAAGAAAAACCACGGTAAAGAAGAAATGCGTGCTCGTGATCTTTTTT 3732 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652 ||| ||||||| || || |||| ||| || ||| || | |||| | ||| | Sbjct 3733 ACGCCATGTGGATACCTGATTTATTTATGAAGCGGGTGGAAGATAACGACGTTTGGTCGC 3792 Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGT 19712 | |||||||| |||||||||| ||| | |||| ||| |||||||| || | ||| Sbjct 3793 TAATGTGCCCCAACGAATGCCCAGGCTTGGCCGATTGCTATGGCGAGGCATTTGAAGAGC 3852 Query 19713 TGTAC 19717 | ||| Sbjct 3853 TTTAC 3857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548462844123840