Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq3628 120 1e-22 seq4979 109 2e-19 >seq3628 Length=2627 Score = 120 bits (132), Expect = 1e-22 Identities = 207/295 (70%), Gaps = 7/295 (2%) Strand=Plus/Minus Query 7282 GTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCC 7341 || ||||| ||||| ||||| || || | || | || ||||| ||||| | | Sbjct 610 GTCAACAAGGTCATCCTGGTCGGCAATCTGGGGGCCGATCCGGAGGTCCGCTCGTTTCAG 551 Query 7342 AACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAG 7401 ||||| ||| ||||||| | ||||||| || |||||||| |||||| | Sbjct 550 AACGGTGGCCGGGTCTGCAACATCCGCATCGCCACGTCAGAAAGCTGGAAAGACAAGAAT 491 Query 7402 ACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTT---CGGTCGCCTG 7458 ||||| | | ||||| ||| |||||| ||| || | | |||| || | ||| Sbjct 490 ACCGGTGACCGGCAGGAGCGCACCGAGTGGCACACGGTTGCGATCTTTTCCGAAGGTCTG 431 Query 7459 GCGGAGATCGCCG-GCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGG-CAGCC 7516 | | | | || | ||| | |||||||||||| | |||||||| ||||||| |||| Sbjct 430 GTCGGGGTTGCGGAGCGCTT-CCTGCGCAAGGGCAGCAAGGTCTACATCGAAGGTCAGC- 373 Query 7517 TGCGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGT 7571 | ||||||||||||||||||| ||| | || |||||||| |||| ||||||||| Sbjct 372 TCCGCACCCGCAAGTGGCAGGACCAGCAGGGACAGGACCGCTACAGCACCGAGGT 318 >seq4979 Length=1283317 Score = 109 bits (120), Expect = 2e-19 Identities = 197/288 (68%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 7282 GTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCC 7341 ||||| |||| ||| | ||||| || | || || |||||| | | || | | || Sbjct 318246 GTTAATAAAGCAATTATCGTTGGCAATCTGGGCAAGGATCCGGAAGTCAGATATACGGCC 318305 Query 7342 AACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAG 7401 | ||| | ||| | |||||| || | || |||||||| | ||||||||||||| | Sbjct 318306 AGTGGCGAGGCGATTTGCAACATTACTGTGGCGACCAGCGAAAACTGGAAGGACAAGACG 318365 Query 7402 ACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTGGCG 7461 ||||| || | | |||| |||||| || ||| | || ||||| ||||| Sbjct 318366 ACCGGAGAGAAGAAAGAACAGACCGAGTGGCATCGCATTTCTTTTTTCGGAAAGCTGGCT 318425 Query 7462 GAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTGCGC 7521 || | || ||| |||| || ||||| || ||| |||| ||||| ||||| | || Sbjct 318426 GAAGTTGCAGGCCAGTATCTTAAAAAGGGATCGCAGATCTATGTCGAGGGCAGTATCCGT 318485 Query 7522 ACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAG 7569 ||||| |||||| | |||| |||||||| || ||||| |||||| Sbjct 318486 ACCCGGAAGTGGACCGACAAGGAAGGCCAGGAGCGTTACACGACCGAG 318533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194798295412792