Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq6036 668 0.0 >seq6036 Length=8020 Score = 668 bits (740), Expect = 0.0 Identities = 680/886 (77%), Gaps = 8/886 (1%) Strand=Plus/Plus Query 176203 TGTTTTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCA 176262 |||| ||| | ||||| || ||||| || || || |||||||| ||||| || || ||| Sbjct 132 TGTTACATCATCGCATTCATCGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCA 191 Query 176263 GTAGCAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCA 176322 |||||||| || || | || || |||||||||||||| || ||||| |||| || || Sbjct 192 GTAGCAGGTTCATTATTATACGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCT 251 Query 176323 AACGCAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTC 176382 ||||| ||||| | |||||||||||||| ||||||||||| || | || || ||| | Sbjct 252 AACGCTATCGGTATGCACTTCTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTA 311 Query 176383 TACAATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTAC 176442 ||||| || || || |||||| | | || | |||||| | | || | || ||||| Sbjct 312 TACAACGGTGGTCCTTACCAATTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCTTAC 371 Query 176443 ATGGGACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCA 176502 ||||| || |||||||| | |||| | |||| |||||||||||||||| || || Sbjct 372 ATGGGTCGTGAATGGGAATTATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCT 431 Query 176503 TACTCTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGA 176562 | |||||| |||||| | ||||| ||||| ||| | || || ||| | |||||||| Sbjct 432 TTCTCTGCTCCAGTAGCAGCAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGT 491 Query 176563 TCTTTCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTC 176622 || |||||||||||||||||| | || ||||| ||||| |||||||| ||||| |||||| Sbjct 492 TCATTCTCTGATGGTATGCCTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTC 551 Query 176623 CAAGCAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTT 176682 ||||| |||||||||||| |||||||||||||||| ||| ||| || || ||||| ||| Sbjct 552 CAAGCTGAGCACAACATTTTAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTT 611 Query 176683 GGTGGATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAG 176742 ||||| ||| | |||||||| |||||||| | || |||||||| | || | || Sbjct 612 GGTGGTTCTTTATTCTCAGCTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAA 671 Query 176743 ACAACCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATAC 176802 ||||| |||| ||||||| |||||||||||||||||||| ||||||||||| || ||| Sbjct 672 ACAACTGAAAGCGAATCAACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTAC 731 Query 176803 AACATTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAAT 176862 ||||| || || || ||||||||||| |||||| | |||||||| || ||||| ||||| Sbjct 732 AACATCGTTGCAGCTCACGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAAC 791 Query 176863 AACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACT 176922 ||||| | | | ||||||||| | || || |||||| | | |||||||| ||| Sbjct 792 AACTCTCGTGCTTTACACTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACT 851 Query 176923 GCAATGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTC 176982 || |||||| || | || ||||| |||||| | |||||||||||||||||||| || || Sbjct 852 GCTATGGGTATTAGTACTATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTT 911 Query 176983 TTAG----ACAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAA 177038 ||| |||| ||| || || || |||| |||||| |||||||||| | Sbjct 912 GTAGATTCACAA----GGTCGTGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGA 967 Query 177039 CCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCA 177084 | ||||||||||| |||||||| ||||| || |||||||||||| Sbjct 968 TTTAGGTATGGAAGTAATGCACGAACGTAACGCGCACAACTTCCCA 1013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603426235307520