Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_028666.1 Length=36595 Score E Sequences producing significant alignments: (Bits) Value seq406 95.1 3e-15 >seq406 Length=46826 Score = 95.1 bits (104), Expect = 3e-15 Identities = 138/191 (72%), Gaps = 8/191 (4%) Strand=Plus/Plus Query 19570 TTCCACTCGCTTGAGTGTACGCCTTCCGGCTAGTCGTTGAACCTTCCCCTGTTTGGGGCT 19629 |||| |||||| | |||| | || | | ||||||||||||||| ||||| | || Sbjct 5579 TTCCCTTCGCTTAAAGGTACTCTTTTCAGATAGTCGTTGAACCTTAGGCTGTTCGCCTCT 5638 Query 19630 TGGCTGCTGATTACCCAAT-CGTTA-----AAATTTTCAAACATTCACGCTTATGCTTAT 19683 |||||||||||| |||| | || | | |||||||| |||||||| ||| |||| | Sbjct 5639 TGGCTGCTGATTGCCCATTGTGTCATCTATACATTTTCAACCATTCACGTTTAGGCTTGT 5698 Query 19684 TTCATCATTACGTTGTAGTTTTTAACGCTCTAAGGGCCTTCCAGCAATTCAATCAATTTA 19743 |||||| || |||||| | | | ||| | |||| | ||||||||| || | ||||| Sbjct 5699 TTCATCCTTGCGTTGTTG-GTGCATAGCT-TTAGGGTGTCCCAGCAATTAAACCGATTTA 5756 Query 19744 ACATGAGCTTT 19754 ||||| || Sbjct 5757 TAGTGAGCCTT 5767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116969847496024