Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq6557 132 2e-26 seq6156 86.0 2e-12 >seq6557 Length=877522 Score = 132 bits (146), Expect = 2e-26 Identities = 396/607 (65%), Gaps = 67/607 (11%) Strand=Plus/Plus Query 4536 CCCAGGCGGCGGCGACCATGCGCATGGGCGGCGGCATCGGCTACGACTTCTCCACCCTGC 4595 ||||||| || | |||||||| || || ||| |||| ||||||||||| | | | Sbjct 124908 CCCAGGCCGCCGAAACCATGCGTCGCGGTGGTGGCGTCGGTTACGACTTCTCTTCGATTC 124967 Query 4596 GCCCCAAGGGCGACCTCATCGTCAAGCT---GCAGTCCCGCAGCTCCGGCCCCATCTCCT 4652 | || |||||| || | |||||| |||||| || ||| |||||| | |||| Sbjct 124968 GTCCGCAGGGCGCCCAC---GTCAAGGGTACGCAGTCGCGTGCCTCGGGCCCCGTATCCT 125024 Query 4653 TCATGGAGATTTTCGACGCAGTC-TGCCGCTGCACGTCCTCGTCCGGCCACCGGCGTGGC 4711 |||| | |||||| | || ||| | | || ||||| ||| |||||| Sbjct 125025 ACATGCGTGTCTTCGAC-CGTTCGTGCGAGACCGTGGAATCCGCCGGCGCCCGTCGTGGC 125083 Query 4712 GCGCAGATGGGCGTCCTGCGCATCGACCACCCCGACATCTTCGACTTCGTCCGCGCCAAG 4771 |||||||||||||| |||||| ||| || || |||||| | ||| ||| ||||||| Sbjct 125084 GCGCAGATGGGCGTGCTGCGCTGCGATCATCCGGACATCGAAGTGTTCATCCACGCCAAG 125143 Query 4772 CAGAACGAGACCTTCCTGCGCGGCTTCAACATCTCCATCGCCGTCACGGACGAGTTCATG 4831 | || | | |||| | ||||||||| ||||||| ||| || || | |||||| Sbjct 125144 GACAAAGG---CGACCTGACCAACTTCAACATTTCCATCGGCGTGACCGATGCCTTCATG 125200 Query 4832 ----CGGGCCA-AGCGC----GACGGCAAGC-------CCTT-------CCA--GCTGAA 4866 | | | | |||| |||| | | | || | ||| |||||| Sbjct 125201 GAAGCTGTCGATAGCGACAGTGACGTCGAACTGGTACACCGTGCCGAACCCAACGCTGAA 125260 Query 4867 ----GTTC----------------------GGCGGCC---GCGTCTACCGCGAGGTGGAC 4897 |||| | ||||| | || |||||| | ||| | Sbjct 125261 ATGCGTTCCTCTGGCGCCTACCTGCGCGAGGACGGCCTGTGGGTTTACCGCAAAGTGCGC 125320 Query 4898 CCCAACGAGCTGTGGGACGCGGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTC 4957 || ||| |||||| || ||| ||| ||||||| ||| |||||||||||| || Sbjct 125321 GCCCGCGACCTGTGGAACCAGGTGATGAAATCCACCTACGACCATGCCGAGCCGGGCATC 125380 Query 4958 CTGTTCATCGACCGCATCAACGAGATGAACAACCTCCACTACTGCGAGACCATCGCGGCG 5017 |||||| |||||||||| ||| | ||||||||| | || ||||| |||| ||| Sbjct 125381 CTGTTCCTCGACCGCATGAACAAAGACAACAACCTCAATTATTGCGAAGTGATCGAGGCC 125440 Query 5018 ACCAACCCGTGCGGCGAGCAGCCGCTGCCACCGTTCGGCGCCTGCCTGC-TCGGCTCCTT 5076 |||||||| |||| ||||||||| ||||| || | |||| ||| |||| | || || | Sbjct 125441 ACCAACCCCTGCGCCGAGCAGCCCCTGCCCCCCTACGGCTGCTG-CTGCTTGGGATCGAT 125499 Query 5077 CAACCTG 5083 ||||||| Sbjct 125500 CAACCTG 125506 >seq6156 Length=1911 Score = 86.0 bits (94), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 5474 GAGCACGGCGTCCGCAACTCCCACCTGACCAGCATCGCCCCGACCGGCACCATCAGCCT- 5532 || |||||| |||||||||| |||||| |||||| ||||| ||||||||||||||||| Sbjct 1125 GAACACGGCATCCGCAACTCGCACCTGCTCAGCATTGCCCCCACCGGCACCATCAGCCTG 1066 Query 5533 --CTGTGCCGACAACATCAGC 5551 || |||||||||| |||| Sbjct 1065 GCCTTTGCCGACAACGCCAGC 1045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187496678978568