Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_028950.1 Length=223932 Score E Sequences producing significant alignments: (Bits) Value seq112 107 3e-18 >seq112 Length=422422 Score = 107 bits (118), Expect = 3e-18 Identities = 181/261 (69%), Gaps = 6/261 (2%) Strand=Plus/Plus Query 99223 CTCAGGAACCACATCGCCAGCACGACGAACGATCACCTTATCGCCAATTCGCAGACCTTT 99282 ||| |||| ||| ||||| || || |||||||||||| ||||||| || || | | | || Sbjct 107111 CTCGGGAATCACGTCGCCGGCTCGGCGAACGATCACCGTATCGCCGATCCGGACATCCTT 107170 Query 99283 GCGATGGATTTCATCTTCGTTATGCAGTGTTGCGTTGGAAACCCACACACCGCCCACGAA 99342 ||| | | ||| ||||| || |||| || || |||| ||| || || || || || Sbjct 107171 GCGCCGCACTTCGTCTTCATTGTGCAAGGTGGCATTGGTCACCGTGACGCCACCGACAAA 107230 Query 99343 AACGGGCTTCAGGCGCCCCACGGGGGTGATGGCTCCCGTTCTACCTACTTGAACTTCAAT 99402 ||| ||| | || | |||| || |||| || || |||| || || || || ||||| Sbjct 107231 AACCGGCCTGAGCCTGGCCACCGGAGTGAGCGCCCCGGTTCGGCCGACCTGGACGTCAAT 107290 Query 99403 CGCCTCTAGCGTC---GTTACAGCCTCTTCTGCAGGGAACTTCCACGCGATAGCAAAACG 99459 || ||| | || | |||||||| || | ||| || ||||| ||||| || Sbjct 107291 ---GTCGAGCACCTCGGTGAGCGCCTCTTCGGCGGCGAATTTGTGGGCGATGGCAAAGCG 107347 Query 99460 AGGGGCGCGAGACACATAACC 99480 || ||||| || ||| |||| Sbjct 107348 CGGCGCGCGCGAGACAAAACC 107368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716373476475520