Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1224 123 2e-23 >seq1224 Length=1352561 Score = 123 bits (136), Expect = 2e-23 Identities = 232/337 (69%), Gaps = 7/337 (2%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || || | |||||| |||||||||| ||| ||||||||||||||||||||||| | ||| Sbjct 1087490 TGTGCAAGCATGTATGTGAGCAGAGAGTAGCTAGCAATGTTGAACGGCACCCCGAGGCCC 1087549 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCT--CCCCATTC-GCGACGTAGAAT 6736 |||||| | || || || || | ||| || || || | | | || || |||||||| Sbjct 1087550 ATGTCTGCTGAACGCTGGTACATCTGACACGAGAGATAGCGGCGCTCGGCCACGTAGAAC 1087609 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || || |||||| ||||| || ||||| || || || ||||| || Sbjct 1087610 TGCACCAGACAGTGGCAGGGGGGCAGAGCCATGGCCCCCAGGTCAGCGGGATTCCAAGCA 1087669 Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTC--AAGGTGTCGATCACGTACTGCA 6854 | ||| | ||| | || |||||| || || | ||| | || || ||||| | ||||| Sbjct 1087670 CTCATGATGATGCGTCGGTCATCTGGATT--GGTTCGTAGAGTCTCAATCACTTGCTGCA 1087727 Query 6855 GCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGT 6914 ||| ||| | || ||| | | |||| | | | || || |||| || ||||||| Sbjct 1087728 ACTGATCCACACCTTGTGTAGCGTGGTCCTCGTGCATGCCTCGGTACTGGGCGCCAAAGT 1087787 Query 6915 GTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951 ||| ||| ||||| || || || || || | ||||| Sbjct 1087788 GTCGCCATTGGAAGCCATACACTGGTCCAAGATCGCC 1087824 Score = 123 bits (136), Expect = 2e-23 Identities = 232/337 (69%), Gaps = 7/337 (2%) Strand=Plus/Minus Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453 ||||| | || || || || || ||||| ||| |||||||||| || |||| || || Sbjct 1087824 GGCGATCTTGGACCAGTGTATGGCTTCCAATGGCGACACTTTGGCGCCCAGTACCGAGGC 1087765 Query 34454 AGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTT- 34512 | | | |||| | | ||| || | ||| ||| ||||| | ||||| || || | Sbjct 1087764 ATGCACGAGGACCACGCTACACAAGGTGTGGATCAGTTGCAGCAAGTGATTGAGACTCTA 1087705 Query 34513 -GAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCC 34571 ||| | || || |||||| || | ||| | ||| | || ||||| || || || Sbjct 1087704 CGAACC--AATCCAGATGACCGACGCATCATCATGAGTGCTTGGAATCCCGCTGACCTGG 1087647 Query 34572 CTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGC-GAATGGGG-- 34628 ||||| || ||||| |||||| || || |||||||| || || | | Sbjct 1087646 GGGCCATGGCTCTGCCCCCCTGCCACTGTCTGGTGCAGTTCTACGTGGCCGAGCGCCGCT 1087587 Query 34629 AGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACA 34688 | || || || ||| | || || || || | ||||||||| | |||||||||||||||| Sbjct 1087586 ATCTCTCGTGTCAGATGTACCAGCGTTCAGCAGACATGGGCCTCGGGGTGCCGTTCAACA 1087527 Query 34689 TTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||||| ||| |||||||||| |||||| | || || Sbjct 1087526 TTGCTAGCTACTCTCTGCTCACATACATGCTTGCACA 1087490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448211768761920