Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq1224 82.4 6e-11 >seq1224 Length=1352561 Score = 82.4 bits (90), Expect = 6e-11 Identities = 133/191 (70%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 ||||| || | ||| |||| ||||||||| | || | |||||| || | || || || Sbjct 1087478 AGCCCAGTGATGTGTGCAAGCATGTATGTGAGCAGAGAGTAGCTAGCAATGTTGAACGGC 1087537 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCG---TTT 118650 || || || |||||||||||||| | |||||||| || || ||||| | | | | Sbjct 1087538 ACCCCGAGGCCCATGTCTGCTGAACGCTGGTACATCTGACACGAGAGATAGCGGCGCTCG 1087597 Query 118651 GCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGGGCA 118710 || || || ||||| | ||| || || |||||| |||||| | ||| | || Sbjct 1087598 GCCACGTAGAACTGCACCAGACAGTGGCAGGGGGGCAGAGCCATGGCCCCCAGGTCAGCG 1087657 Query 118711 GGATTCCAGGC 118721 |||||||| || Sbjct 1087658 GGATTCCAAGC 1087668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414431155224304