Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1112 111 4e-19 seq2446 102 2e-16 >seq1112 Length=3255245 Score = 111 bits (122), Expect = 4e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || | |||||| || || || || || || || || || | |||||| | Sbjct 2620694 AGTCTGAGAACCAAGTGAAGGGTAGATTCCTTCTGAATATTGTAGTCGGAAAGGGTGCGG 2620753 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || |||||||||||||||||||| | ||| || ||||| || || | ||||||| Sbjct 2620754 CCATCCTCAAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCTTCC 2620813 Query 211017 TTGTCCTGGATCTT 211030 ||||||||||| || Sbjct 2620814 TTGTCCTGGATTTT 2620827 Score = 107 bits (118), Expect = 4e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| || || | |||||| ||||| || || || || || || || | || || | Sbjct 2622951 AGTCTGAGAACCAAGTGAAGGGTGGATTCCTTCTGAATATTGTAGTCTGAGAGTGTGCGG 2623010 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| || |||||||||||||||||||| | ||| || ||||| || || | ||||||| Sbjct 2623011 CCATCCTCAAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGGGATTCCTTCC 2623070 Query 211017 TTGTCCTGGATCTT 211030 ||||||||||| || Sbjct 2623071 TTGTCCTGGATTTT 2623084 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || || |||||||| || | ||||| | ||||| || |||||||||||||||||||| Sbjct 2620093 TTCTGAATGTTATAGTCTGAGAGGGTGCGCCCATCCTCAAGCTGCTTGCCTGCGAAGATC 2620152 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 | ||| |||||||| || || | |||||||||||||||||| || Sbjct 2620153 AAGCGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATTTT 2620196 Score = 91.5 bits (100), Expect = 3e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 210948 AGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGA 211007 ||||| | ||||| || |||||||||||||||||||| | ||| |||||||| || || Sbjct 2622647 AGGGTGCGACCATCCTCAAGCTGCTTGCCTGCGAAGATCAAGCGCTGTTGGTCTGGGGGG 2622706 Query 211008 ACTCCTTCCTTGTCCTGGATCTT 211030 | |||||||||||||||||| || Sbjct 2622707 ATTCCTTCCTTGTCCTGGATTTT 2622729 >seq2446 Length=1160753 Score = 102 bits (112), Expect = 2e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| || || ||||| || ||||||||||| | || || | ||||| Sbjct 439673 AGGACAAGGTGAAGGGTCGATTCTTTCTGAATGTTATAATCTGAGAGTGTGCGGCCATCC 439614 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 || ||||||||||| || || || || |||||||||||||| |||| Sbjct 439613 TCGAGCTGCTTGCCAGCAAAAATCAGCCGTTGTTGGTCAGGGGGAA 439568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159017800626140