Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1224 145 6e-30 >seq1224 Length=1352561 Score = 145 bits (160), Expect = 6e-30 Identities = 247/352 (70%), Gaps = 7/352 (2%) Strand=Plus/Plus Query 27205 TCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAG 27264 || ||||| |||| ||| || | |||||| ||||| ||||||||||| || ||||| || Sbjct 1087475 TCGAGCCCAGTGATGTGTGCAAGCATGTATGTGAGCAGAGAGTAGCTAGCAATGTTGAAC 1087534 Query 27265 GGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT---CTCCA 27321 || |||||||| |||||||| | || | |||||| | |||||||||||| | | Sbjct 1087535 GGCACCCCGAGGCCCATGTCTGCTGAACGCTGGTACATCTGACACGAGAGATAGCGGCGC 1087594 Query 27322 TCGCTTACGTAAAACTGACATATGGC-GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTC 27380 ||| ||||| ||||| || | | |||||| || || ||||||||| |||| ||| Sbjct 1087595 TCGGCCACGTAGAACTG-CACCAGACAGTGGCAGGGGGGCAGAGCCATGGCCCCCAGGTC 1087653 Query 27381 TTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAG-GT 27439 ||| ||||| || | || ||||||||| | ||| ||||| ||| | | | ||| | Sbjct 1087654 AGCGGGATTCCAAGCACTCATGATGATGCGTCGGTCATCTGGATTGGTTC-GTAGAGTCT 1087712 Query 27440 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGT 27499 | | | | |||| ||||||||| || | || ||| | |||| | || Sbjct 1087713 CAATCACTTGCTGCAACTGATCCACACCTTGTGTAGCGTGGTCCTCGTGCATGCCTCGGT 1087772 Query 27500 ACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCC 27551 ||| || || || || | ||||||||| || ||||| ||||| || || || Sbjct 1087773 ACTGGGCGCCAAAGTGTCGCCATTGGAAGCCATACACTGGTCCAAGATCGCC 1087824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369466507557716