Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq3574 95.1 2e-14 seq112 95.1 2e-14 >seq3574 Length=6226 Score = 95.1 bits (104), Expect = 2e-14 Identities = 184/266 (69%), Gaps = 7/266 (3%) Strand=Plus/Plus Query 99179 ATGAGCGAAGGCGTGCCGAAGAAAGACCGTACGGGAACCGGTACCCT--GTCTATTTTCG 99236 |||||| |||||||| | |||| |||||| || || ||||| || | | || ||| | Sbjct 2672 ATGAGC-AAGGCGTGGCCAAGACAGACCGCACCGGCACCGGCACGCGCAGCCTGTTT--G 2728 Query 99237 GGCACCAGATGCGTTTCAATCTGCAAGAAGGCTTTCCGCTGGTAACGACTAAG-CGCTGT 99295 | ||||||||||| ||| ||||| | |||||||| ||| |||| || || ||| | || Sbjct 2729 GCCACCAGATGCGCTTCGATCTGAACGAAGGCTTCCCGGTGGTCACCACGAAGAAGGTG- 2787 Query 99296 CACATGCGTTCGATTATTCACGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAA 99355 ||| || || || | |||||||||||||||||| |||||| |||| | | Sbjct 2788 CACCTGAAAAGCATCATCCTGGAACTGCTGTGGTTCCTGCGCGGCGATTCCAACGCCCGC 2847 Query 99356 TATTTAAATGATAATGGTGTAACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTC 99415 | | | ||| || || || ||| |||||||| ||||||||||| Sbjct 2848 TGGCTGCAGGATCGCGGCGTGCGCATCTGGAACGAATGGGCCGGGCCCGATGGCGACCTG 2907 Query 99416 GGACCGGTATACGGTAAACAGTGGCG 99441 || ||||| ||||| |||||||| Sbjct 2908 GGGCCGGTGTACGGCGTGCAGTGGCG 2933 >seq112 Length=422422 Score = 95.1 bits (104), Expect = 2e-14 Identities = 169/242 (70%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 99203 GACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTG--C 99260 |||||||| || ||||| |||| || | ||||| |||||||||||| | ||| | Sbjct 129446 GACCGTACCGGTACCGGCACCCGTTCCGTCTTCGGCTGGCAGATGCGTTTCGACCTGGCC 129387 Query 99261 AAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGCGTTCGATTATTCACGAA 99319 ||| ||||||||| || || || ||| |||| ||| | || || ||||||||| Sbjct 129386 AAG--GGCTTTCCGGTGACGACCACCAAGAAGCTG-CACCTCAAGTCAATCATTCACGAA 129330 Query 99320 CTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGTAACT 99379 || |||||||| | ||||||| ||||| || || | | || | || ||| Sbjct 129329 TTGTTGTGGTTCATTCAAGGCGACACCAACATCTCGTACCTTCAGGAGCACGGAGTACGC 129270 Query 99380 ATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACAGTGG 99439 || ||||| | ||| || | | ||||||||||| ||||| ||||| || |||||| Sbjct 129269 ATCTGGGATGCGTGGGCCGACGAGCACGGCGACCTCGGCCCGGTCTACGGCAAGCAGTGG 129210 Query 99440 CG 99441 || Sbjct 129209 CG 129208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716383075391200