Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq3574 132 8e-26 seq112 129 9e-25 >seq3574 Length=6226 Score = 132 bits (146), Expect = 8e-26 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 202543 AAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGAC 202602 |||| |||||| |||||||||||||||||| | |||| || ||||||||| || || Sbjct 2689 AAGACAGACCGCACCGGCACCGGCACGCGCAGCCTGTTTGGCCACCAGATGCGCTTCGAT 2748 Query 202603 CTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCAC 202662 |||| |||||||||||| |||| |||||||| ||||| ||||| ||||| | Sbjct 2749 CTGAACGAAGGCTTCCCGGTGGTCACCACGAAGAAGGTGCACCTGAAAAGCATCATCCTG 2808 Query 202663 GAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTC 202722 || ||||||||||||||| || || ||||| | | | ||| | ||| ||| || Sbjct 2809 GAACTGCTGTGGTTCCTGCGCGGCGATTCCAACGCCCGCTGGCTGCAGGATCGCGGCGTG 2868 Query 202723 ACTATCTGGGACGAATGGGCGCGGG 202747 |||||| |||||||||| |||| Sbjct 2869 CGCATCTGGAACGAATGGGC-CGGG 2892 >seq112 Length=422422 Score = 129 bits (142), Expect = 9e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 202534 GGTCATGAAAAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATG 202593 || |||||||| ||||||||||| |||||||| || ||| | ||||| |||||| Sbjct 129461 GGCCATGAAAAATCCGACCGTACCGGTACCGGCACCCGTTCCGTCTTCGGCTGGCAGATG 129402 Query 202594 CGGTTTGACCTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCT 202653 || || |||||| || | ||||| || || |||||| || ||| | |||||| || Sbjct 129401 CGTTTCGACCTGGCCAAGGGCTTTCCGGTGACGACCACCAAGAAGCTGCACCTCAAGTCA 129342 Query 202654 ATCATTCACGAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGAT 202713 ||||||||||| || |||||||| | |||| |||||||||||| ||||| | || Sbjct 129341 ATCATTCACGAATTGTTGTGGTTCATTCAAGGCGACACCAACATCTCGTACCTTCAGGAG 129282 Query 202714 AACGGGGTCACTATCTGGGACGAATGGGC 202742 |||| || |||||||| | ||||| Sbjct 129281 CACGGAGTACGCATCTGGGATGCGTGGGC 129253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788230959256000