Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq4979 143 1e-29 >seq4979 Length=1283317 Score = 143 bits (158), Expect = 1e-29 Identities = 234/333 (70%), Gaps = 13/333 (4%) Strand=Plus/Plus Query 24859 GGAATGAGCTACGGCTGGACTCTCGGTGAGAACGGCTGGAACACTGGTATGGACGCGAAC 24918 ||| | | |||||||||||| ||||| |||| ||||||| |||| || |||||||| ||| Sbjct 440465 GGACTCAACTACGGCTGGACGCTCGGCGAGAGCGGCTGGGACACCGGCATGGACGCCAAC 440524 Query 24919 CTTCTTTGGCTGGG-GCGCT--TCGGCACTCAGCTGTCAGTGAAGGATCGGGATCTCGCA 24975 || | || || ||| | ||||| ||||| ||||| || || || ||| | Sbjct 440525 CTCAAGCGCCTCGGCGCGGTGGTCGGC------CTGTCCGTGAAAGACCGCGACCTCACC 440578 Query 24976 ACACCGCCCGGAAGCCCCGCGTCTGGCGACACATACATCGTGGCAGCTTCGCCCACTGGT 25035 ||||| || | ||||| || |||||| ||||||||| | ||| | |||| ||| Sbjct 440579 ACACCACCGGCCAGCCCTGCCAACGGCGACCGCTACATCGTGCCTGCTGCTGCCACGGGT 440638 Query 25036 GCATGGGCAGGGCAAGCCGGCAAAGTCGCTGTCTGGACAGGGTCG--GCATGGGTGTTCG 25093 | |||||||| || || | | |||| || || || | || || |||| |||| Sbjct 440639 GTGTGGGCAGGCAAAACCAACCAGATCGCGGTGTG--CATTGCCGATGCCTGGGAGTTCC 440696 Query 25094 GCACGCCGAGGGTGGGCTGGATAGCCTATATCGAGGACGAGCAGAAGCTCACAGCCTACA 25153 | |||| | | | |||||| | ||| |||||||||||| |||||| | ||||||| Sbjct 440697 ACTCGCCCAAGATCGGCTGGCTTTGCTACATCGAGGACGAGGCCAAGCTCTCGGCCTACA 440756 Query 25154 AGGCCGGAGGATGGTCGGCAGGCATTGCCATCT 25186 || || || ||| |||||||| ||||||| Sbjct 440757 AGTCCACCGGCTGGAGCGCAGGCATCGCCATCT 440789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187269503357696