Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq6036 762 0.0 >seq6036 Length=8020 Score = 762 bits (844), Expect = 0.0 Identities = 759/981 (77%), Gaps = 2/981 (0%) Strand=Plus/Plus Query 163919 TGGGAACAATTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTC 163978 ||||||| |||||| ||| | ||| || || || ||||| || |||||||||| Sbjct 33 TGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTT 92 Query 163979 GGCGTCCTGATGATTCCCTGCCTGCTGG-CAGCGACTACATGTTTCATCATCGCCTTCAT 164037 || | ||| |||||| | | | |||| ||| | |||| ||||||||| ||||| Sbjct 93 GGTTGTTTAATG-TTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCAT 151 Query 164038 CGGTGCTCCTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTA 164097 || |||||||| || || |||||||| ||||| || || || || ||||| | | || Sbjct 152 CGCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATA 211 Query 164098 TGGAAACAACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTT 164157 || |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| Sbjct 212 CGGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTT 271 Query 164158 CTACCCCATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCA 164217 |||||| || ||||||||||| | || || ||| | |||||||||||||||| ||| Sbjct 272 CTACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCA 331 Query 164218 ACTCGTTGTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACT 164277 | | | || | |||||| | | || | |||||||||||||||| |||||| | Sbjct 332 ATTAATCGTTTGTCACTTCTTATTAGGAGTAGCATCTTACATGGGTCGTGAATGGGAATT 391 Query 164278 TTCTTACCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGC 164337 ||||||||| | ||||||||||||||||| | |||||| | ||||||||| || || || Sbjct 392 ATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAGC 451 Query 164338 AGCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCC 164397 ||| |||||| ||| | || || || | ||||||||||| |||||||||| ||||| Sbjct 452 AGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGCC 511 Query 164398 TCTGGGCATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCT 164457 | | || || ||||| || ||||||| |||||| || ||||| |||||||||||||| | Sbjct 512 TTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTTT 571 Query 164458 CATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGC 164517 |||||||| ||||| ||| || || || ||||| ||||| |||||| | ||| || Sbjct 572 AATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAGC 631 Query 164518 AATGCACGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCA 164577 ||||||||||| | || |||||||| | ||||||| || || |||| || || Sbjct 632 TATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAATCAAC 691 Query 164578 GAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGG 164637 ||||| |||||||| || ||||| ||||||||||| |||||||||||||| |||||||| Sbjct 692 TAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCACGG 751 Query 164638 TTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTT 164697 |||||| |||||| | || |||||||||||||| ||||||||||| ||| | | ||||| Sbjct 752 TTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACACTT 811 Query 164698 CTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCAT 164757 |||| | || |||||| ||| | ||||||||||| |||||| |||| |||| || || Sbjct 812 CTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTACTAT 871 Query 164758 GGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGT 164817 ||| |||||| | |||||||||||||||||||| || | | ||| || |||||||| Sbjct 872 GGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGT 931 Query 164818 GCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGA 164877 ||||||| ||||| || | | |||||||||| | | || |||||||| |||||||| Sbjct 932 AATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCACGA 991 Query 164878 GCGTAATGCTCACAACTTCCC 164898 ||||| || ||||||||||| Sbjct 992 ACGTAACGCGCACAACTTCCC 1012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557591412935520